Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0799 ATGGAAGCGGTAGAGTTCTTTCCCTCTGGTTGGTTCCTATTGTCATCAGTTCATCCCACATCACTCACTCAAGCTTCTCAACCTCATCTTCTTCATCCCTCTATTCTCTTCGTTCTTCATCGCAATTTGCCAATGTCCTCCTTCAGAATCCAACCCACTGCATGTGCTCTCTCCTCCACCATCAACCAACACCTCCGCTTACGCCCCCACCACCCCTCCCTTTCTTCCATTTGTTTTACCCATTGCGCGATTCGTGGCCGGGGCACTCTCCGGAGGACCCTTAGGGTTTCTATGTCTTCTTCCCCTTCTTCGTCCAGCCCTCTTCAGATTTGCGTCAAAGATTCTATTACCACTCCCGGCAAGCTGGGCGACTGCCCCTTTTGCCAGAGAGTATTGCTGACAATGGAGGAAAAGCATCTACCTTATGACATGAAGTTGGTGGATCTGAAACACAAGCCTGAATGGTTCTTAAAAATCAACCCAGAGGGTAAAGTTCCTGCGGTAAACCTTGATGAGAAGTGGGTTGCTGATTCAGATGTTATCACACAAGCATTGGAAGAGAAGTTTCCTAGCCCACCATTGGGAACCCCACCTGAAAAGGCAGCAGTTGGCTCAAAGATCTTTTCTACATTCATTGGGTTTCTCAAGAGCAAAGATCCAAATGATGGGACAGAGCAAGGCTTATTAAGTGAACTAGGCTCTTTGAATGATTACCTCAAGGAAAACGGTCCTTTTATCAATGGGAAAGACATATCTGCGGTAGACTTATCCCTTGGACCAAAGCTATACCACATGGAGATTGCTTTGGGACATTATAAGAAATGGACGGTTCCTGATTCACTGCCCTATGTGAAGTCTTATATGAAGGCTATTTTCTCAAGGGATTCATTCATCAAAACACGTGCACATCCGCAAGATGTTGTTGAAGGCTGGCGTCCAAAAGTTGAGGGCTGA 954 0.4644 MEAVEFFPSGWFLLSSVHPTSLTQASQPHLLHPSILFVLHRNLPMSSFRIQPTACALSSTINQHLRLRPHHPSLSSICFTHCAIRGRGTLRRTLRVSMSSSPSSSSPLQICVKDSITTPGKLGDCPFCQRVLLTMEEKHLPYDMKLVDLKHKPEWFLKINPEGKVPAVNLDEKWVADSDVITQALEEKFPSPPLGTPPEKAAVGSKIFSTFIGFLKSKDPNDGTEQGLLSELGSLNDYLKENGPFINGKDISAVDLSLGPKLYHMEIALGHYKKWTVPDSLPYVKSYMKAIFSRDSFIKTRAHPQDVVEGWRPKVEG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0799 317 Gene3D Glutaredoxin 107 194 - -
Lele27g0799 317 SUPERFAMILY GST C-terminal domain-like 189 314 IPR036282 -
Lele27g0799 317 FunFam Glutathione S-transferase DHAR3, chloroplastic 195 317 - -
Lele27g0799 317 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 115 193 IPR004045 -
Lele27g0799 317 SFLD Main (cytGST) 124 292 - -
Lele27g0799 317 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 107 314 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lele27g0799 317 CDD GST_C_DHAR 194 314 - -
Lele27g0799 317 CDD GST_N_family 125 186 - -
Lele27g0799 317 SUPERFAMILY Thioredoxin-like 124 191 IPR036249 -
Lele27g0799 317 FunFam Glutathione S-transferase DHAR3 chloroplastic 106 194 - -
Lele27g0799 317 Gene3D - 195 317 - -
Lele27g0799 317 Pfam Glutathione S-transferase, N-terminal domain 124 193 IPR004045 -
Lele27g0799 317 SFLD Glutathione Transferase (cytosolic) 124 292 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0799 Lele-ChrLele27 16054234 16058880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0799 45 317 Glutathione S-transferase Gene Family AT5G16710 64.000 3.58e-127 362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0799 27 16054234 16058880 Lele25g1286 25 8689563 8691365 CCT
Lele27g0799 27 16054234 16058880 Lele26g1295 26 8586761 8588554 CCT
Lele27g0799 27 16054234 16058880 Lele27g0800 27 16078070 16079872 CCT
Lele27g0799 27 16054234 16058880 Lele28g1286 28 8625373 8627151 CCT
Lele27g0799 27 16054234 16058880 Lele27g0799 27 16054234 16058880 ECH
Lele25g1288 25 8706712 8710684 Lele27g0799 27 16054234 16058880 hybridization
Lele26g1296 26 8608679 8613008 Lele27g0799 27 16054234 16058880 hybridization