Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0782 ATGGGAAGACAACCTTGCTGTGACAAAGTTGGATTGAAGAAAGGCCCTTGGACTGCTGATGAAGACAAGAAACTCATCAGCTTCATCCTCACCAATGGCCAATGTTGCTGGAGAACTGTTCCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAACTATCTCAGACCAGACCTGAAGAGAGGTCTTCTTTCTGAATATGAAGAGAAAATGGTGATTGATCTCCACGCCCAACTTGGCAACAGATGGTCTAAGATTGCGTCTCATCTTCCCGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTCAAGAAGATGGGGATTGATCCTGTCACTCACAAGCCCCTCTCTGAACAACAACAACAACAACAGACCCGGAATCCGACCCCATCACAGGCACAGATTAATCAACTTCAGATACAACAACAACAGCAACCTGTAACAACTAGCCTCAAGATTGATCAAAATAATGGAGAGTCAGAGACAGAGAAGGCAGACACCTCGTATGAGTCATCATCAACCTTAAATGAATCGAAAGAGGAGGATCATCACAAGATTGATGATGAAACTCCCCCATTTGACGACATCATCAACAGTTTCTGCACTGACGAGGTTCCATTGATTGAACCTGATGAGATTCTAATGCCCTCTTCTGGTCCTACCCCTTCGTCCTCTTCATCTTCTTCTCCTACTTCAAATTCTTCCAACTTCCTAGGAGACCTGGAGCTCCCGGAATTCGAGTGGGCTTGTAATTACAGTGACGATAGCAACGCCAATAGCAACAGTATGGGATTGTGGGATGGTGATGATTTTATGAGCGGTTGGGATTTGCTTTTGAATGATGATGATGCTGACAGGAAGATGGCAGATTTTGATTCTGCTCTGAAACAATGTCCAAGAATGGTCTTGGGTCAAGAATCTTGGGCATATGGGTTGTTTTGA 981 0.4455 MGRQPCCDKVGLKKGPWTADEDKKLISFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSEQQQQQQTRNPTPSQAQINQLQIQQQQQPVTTSLKIDQNNGESETEKADTSYESSSTLNESKEEDHHKIDDETPPFDDIINSFCTDEVPLIEPDEILMPSSGPTPSSSSSSSPTSNSSNFLGDLELPEFEWACNYSDDSNANSNSMGLWDGDDFMSGWDLLLNDDDADRKMADFDSALKQCPRMVLGQESWAYGLF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0782 326 MobiDBLite consensus disorder prediction 225 251 - -
Lele27g0782 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele27g0782 326 MobiDBLite consensus disorder prediction 128 211 - -
Lele27g0782 326 MobiDBLite consensus disorder prediction 128 169 - -
Lele27g0782 326 SMART sant 66 114 IPR001005 -
Lele27g0782 326 SMART sant 13 63 IPR001005 -
Lele27g0782 326 Gene3D - 70 147 - -
Lele27g0782 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele27g0782 326 FunFam MYB transcription factor 11 67 - -
Lele27g0782 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele27g0782 326 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 215 - -
Lele27g0782 326 FunFam MYB-related transcription factor 70 130 - -
Lele27g0782 326 CDD SANT 74 112 IPR001005 -
Lele27g0782 326 MobiDBLite consensus disorder prediction 188 205 - -
Lele27g0782 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele27g0782 326 MobiDBLite consensus disorder prediction 230 251 - -
Lele27g0782 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele27g0782 326 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lele27g0782 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele27g0782 326 CDD SANT 16 61 IPR001005 -
Lele27g0782 326 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0782 Lele-ChrLele27 15920831 15922131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0782 1 326 MYB Transcription Factor Family AT5G16600 47.802 1.69e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0782 Myb_DNA-binding 7.6e-12 CL0123