Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0778 ATGAAGTCTCTGCTTCCTCTTAACATCTTGGTTCCTGCATTGTCGCTGTTTCTGTTCGCCATCGTAGGCGCAGATCTAGCTTCTGATAGAGCCGCTTTGGTGGCTCTGCGTGGTGCCGTTGGTGGCCGTTCCCTTCTTTGGAACCTGTCTCAGACGAGTCCTTGCTTATGGACCGGGGTGTTCTGTGAAAATTCTGCGAAGAACAAGGTTACTACGTTGCGGCTTCCTGGTATGGGTCTTTCTGGGAGACTTCCACTGGGAATTGGGAATCTCACGGAGCTTCAGACTCTGTCTCTTCGCTTTAACGCGCTCTCTGGGCCTATTCCGAGCGACTTTGCTAATCTTGTTAACCTTCGGAACCTTTATTTGCAGGGGAATTTCTTCTCTGGAGAAATCCCTGATTTCCTTTATGGTATGCAGAATTTGGTTCGTTTGAATTTAGCTAAAAACAATTTCAGTGGTGAGATCTCGCCTAACTTTAACAACCTCACGAGGTTAGATACCCTCCTTTTGGAGAACAACCAGCTCACTGGGTCCATTCCTAACCTGCCTGCTCCTCCTCTTGATCAGTTTAATGTTTCATCGAATCGGCTCAACGGGTCCATTCCGGCAAAGTTCTCGCAGTTAGATGCGAGTGCATTTTGGGGGAATTTGTTTCTTTGCGGGAAGCCCTTGCAAGAATGCTCTGGAACGGCGGGTGGAAAGAAGAAGAAGAAGAAGTTATCGGGTGGAGCAATTGCCGGAATTGTAATTGGTTCAGTGGTCGGACTTCTGTTAATTTTACTTCTTCTGTTCTTCTTGTGCGGGAAAAGGAGAAGTAAAGACAAGAATCCGGATACAACACCGGGTAAGAGCGTTGAAATTCCTCAAGAAAAGACAACCAGAGATATTGAGAATGCTGGAGCAAGTTATTCCGCAACAGCCAGAGGTGGTGGTGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGTAATGTCAACAAAGTATTTGATCTTGAGGATTTATTAAGGGCATCGGCAGAAGTACTTGGGAAGGGCACCTTCGGAACCACATATAAGGCTACTTTGGAAATGGGGGTGGTGGTTGCAGTGAAGAGGTTGAAGGATGTAACTGCTCCAGAAAACGAATTCAGAGAGAAAATTGAGCAAGTGGGGAAGATGGTACATAATAACTTGGTCCCGCTCAGAGCTTACTATTATAGCAACGAAGAGAAACTTCTTGCCTATGACTACATGCCCATGGGAAGCTTATCTGCCCTTTTGCATGCTAATAATGGAGCTGGCAGAACCCCCCTAAACTGGGAAACAAGGACTCACATTGCCCTTGGTTCTGCACGTGGGATTGCATACCTACACTCACATGGCCAATCTGCCTCCCATGGAAATATCCAGTCGTCAAACATTCTTCTCACCAAATCTTTTGAAGCCCGTGTTTCTGACTTTGGCCTTGCTCATCTTGCACTCCCAACTTCAACTCCCAACCGCATTTCCGGTTACCGAGCCCCAGAGGTAACAGATGCTCGCAAAATATCCCAAAAAGCAGATGTCTACAGCTTTGGTATAATGCTCTTGGAGCTGCTTACTGGGAAAGCTCCAACACATTCCTCGTTGAATGAAGAAGGGGTGGATCTCCCAAGATGGGTCCAATCTATTGTTCAAGAGGAGTGGAACACTGAGGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAGATGGTCAAGCTCTTGCAGCTTGCACTTGAATGTACCAAACAGTATCCCGACAATCGACCCTCAATGGATGAGGTGGCGAGCAGAATCGAGGAGATTTGTCGTGCCAGTTTAGAGAAAGAGGAAGAGAAGATTCAGTCATTGACGGATCCAGATAGTGGATATTCCCCACCTTGA 1902 0.4664 MKSLLPLNILVPALSLFLFAIVGADLASDRAALVALRGAVGGRSLLWNLSQTSPCLWTGVFCENSAKNKVTTLRLPGMGLSGRLPLGIGNLTELQTLSLRFNALSGPIPSDFANLVNLRNLYLQGNFFSGEIPDFLYGMQNLVRLNLAKNNFSGEISPNFNNLTRLDTLLLENNQLTGSIPNLPAPPLDQFNVSSNRLNGSIPAKFSQLDASAFWGNLFLCGKPLQECSGTAGGKKKKKKLSGGAIAGIVIGSVVGLLLILLLLFFLCGKRRSKDKNPDTTPGKSVEIPQEKTTRDIENAGASYSATARGGGDAKTGRSKRLVFFGNVNKVFDLEDLLRASAEVLGKGTFGTTYKATLEMGVVVAVKRLKDVTAPENEFREKIEQVGKMVHNNLVPLRAYYYSNEEKLLAYDYMPMGSLSALLHANNGAGRTPLNWETRTHIALGSARGIAYLHSHGQSASHGNIQSSNILLTKSFEARVSDFGLAHLALPTSTPNRISGYRAPEVTDARKISQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVKLLQLALECTKQYPDNRPSMDEVASRIEEICRASLEKEEEKIQSLTDPDSGYSPP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0778 633 SUPERFAMILY L domain-like 48 226 - -
Lele27g0778 633 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lele27g0778 633 Gene3D Transferase(Phosphotransferase) domain 1 414 628 - -
Lele27g0778 633 FunFam pollen receptor-like kinase 1 309 413 - -
Lele27g0778 633 FunFam Probable inactive receptor kinase At1g48480 414 616 - -
Lele27g0778 633 Gene3D Phosphorylase Kinase; domain 1 309 413 - -
Lele27g0778 633 PANTHER OS05G0588300 PROTEIN 14 612 - -
Lele27g0778 633 MobiDBLite consensus disorder prediction 273 292 - -
Lele27g0778 633 Gene3D Ribonuclease Inhibitor 185 232 IPR032675 -
Lele27g0778 633 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele27g0778 633 Pfam Protein kinase domain 342 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0778 633 ProSiteProfiles Protein kinase domain profile. 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0778 633 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Lele27g0778 633 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Lele27g0778 633 CDD STKc_IRAK 345 608 - -
Lele27g0778 633 SUPERFAMILY Protein kinase-like (PK-like) 343 604 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0778 Lele-ChrLele27 15871796 15874398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0778 25 608 Receptor kinase-like Gene Family AT1G48480 59.578 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g0778 Pkinase 9.6e-36 CL0016