Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0760 ATGCGGGCCCCACCTCCATGTGCGTTCTGTTCCTTCTTCTCCTTTCTCACTTTCTCATCGTTCTCTGCTCTGGTAGCCAGCTATACCCTTTGCCGCCATTTACTCATCCCTTCTTTTGTTCTGCTTCTTCTTCTCTCTTGTCGTTTGCTTCGCTTTCTGTCTCTGTTTCTCTGGAGAACGAATATGAGGGAAAAAACCCACTTAAAGTTCGAGCTTTTACTCATCTTCCTTTCTGGGTTATTTTCAGTCTTCGTCTTCGTTGGGTCTCAAGCAAACCCTAGCCAAGATGCTCCTGCAATGGAAGCTCTCAAGAAGAGCCTCAACGTCCCTGAATCTATTGGATGGTCCGATTCGGACCCCTGCAAGTGGGACCACGTTGGCTGCGATGAAGGTCGGGTTACCCGGATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGAGTCTTGGAGATCTCACTGAGTTACAGCGCTTGGAGCTTCAGTATAATAACATTTCGGGTCCTCTTCCTAGCTTAAAGGGGTTGGGTTCTTTGCAAGTGCTGCTTCTTAGTAACAACCAATTTAGTTCGATCCCTAGAGATTTTTTCACTGGCATGTCTCAACTTCAATCTGTGGAGATCGATAACAACCCATTTGAGGAATGGGAGATACCTGAAAGTCTTCGAGACGCTTCGTCTCTTCAGAACTTCTCTGCCAACTCGGCTAATATCACAGGCAAAGTACCCGATTTTCTTAATGCAGATGTGTTTCCTGGTTTGACCCTTTTGCATTTGTCCTTCAATAACCTCGAGGGTGGATTTCCTTCGAGCTTTTCTGGTTTGCAGATTGAGACTTTGTGGGTTAATGGGCAGACAGGTAAACTTAATGGAACCATAGAATTTATGCAGAACATGACTTCCTTGAACGAGGTTTGGTTGCATTCAAATGCATTATCAGGTCCATTACCAGATTTTTCAGGCTTGAAGAATTTGGAGGCCTTGAGTTTAAGGGATAATTCGTTTATTGGTCCTGTTCCTTTGTCATTGATAAGTCTTAAATCATTGAAAGTCGTAAATTTGACTAATAACTTACTTCAAGGGCCTGTGCCAGTGTTCAATCCTGGGGTTCAAGTGGATCTGACTAAGGATTCAAATGACTTTTGCTTGCCGACTCCCGGGGATTGCGATCCTCGGGTGAATATTCTTCTTTCCATTGTTAAACTTATGGGATATCCTCAAAGGTTTGCTAAGGAATGGAAGGGCAATGATCCTTGTAATTATTGGCTTGGGATTACATGTAGTAATGGGAACATTACTGTTGTTAATTTTCAGAGGATGGGTTTATCTGGTACCATATCCCCTGAATTTGCCTCACTCAAATCACTGCAAAGAATTATGCTCGCTGATAACTCTCTCACTGGTACAATTCCAGGAGAGCTCGCTACACTTCCTATGCTTACTGAATTGGATCTCGCGAATAATCAGCTTTATGGAAAAGTCCCGTCTTTTAGGAGTAATGTAATCCTTAACACGAATGGTAACAAGGACATAGGCAAGGATAGAAGCAGTTCAACCCCGCCAGGTTCAGCATCTCCGAACCCTTCGGATCAAGGTGCGACAGGAGAAAATGGTGGGATTTCTGCGAATGGTGGCAAAAAATCTTCTCATGTTGCGGTGATTGTAATCGCTGTAGTTGGGGGTGTGTTTTTGGTTTCGATGATAGGTGTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGCAGTTAAGCAGGGTACAGGGCCCGAATGCTCTGGTGATTCACCCTCGTCATTCTGGATCAGATAACGAAAGTTTGAAAATAACAGTTGCTGGCTCGAGTGTCAGTGTTGGCACGGCTAGTGAAACTCAAACAGTACCTGGTAGTGAGGCGGGAGGAGATATCCAAATGGTTGAAGCTGGAAACATGGTCATTTCCATACAAGTCCTTCGGAACGTGACCGACAATTTCAGCGAAAAGAATATATTGGGACAAGGTGGTTTTGGAACGGTATACAAAGGCGAACTTCACGATGGTACCAAAATTGCAGTGAAAAGAATGGAGTCTGGAGCGATAACCGGAAAGGGTGCGTCAGAATTTAAATCTGAAATTGCTGTTCTGACAAAAGTTCGCCACCGCCATCTTGTTGCACTTCTAGGCTATTGCTTGGATGGGAATGAAAAGCTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTACAGCCCTTGGACTGGAATAGGAGGTTGATCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTACCTTCATGGCTTAGCCCATCAAAGCTTTATACATAGAGACCTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCGAAGGTCGCAGATTTTGGTCTCGTCCGTCTTGCTCCAGAAGGAAAAGCCTCCATAGAAACACGAATTGCTGGAACATTCGGATACTTGGCACCAGAATATGCAGTTACTGGACGTGTGACAACTAAGGTAGATGTATACAGTTTTGGGGTGATACTGATGGAAATCATTACTGGAAGGAAAGCGCTGGATGAAACCCAACCCGAGGACAGCATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAACGAAGAATCATTTAGCAAGGCCATCGATCCCACAATCGATCGCAACGAGGAAACTCTCGCCAGCATTCGCACGGTAGCGGAGCTAGCTGGCCACTGCTGCGCGCGGGAGCCATATCAAAGGCCGGACATGGGTCATGCCGTGAATGTTCTTTCCTCTTTGGCAGAGCTCTGGAAGCCATCTGATCAGAGTTGTGAAGATATATATGGGATTGATCTTGACATGTCTTTGCCTCAAGCGCTTAAAAAATGGCAGGCTTATGAAGGTGGAGGTGGAGACTCTTCTTCTTCTTCTTCGCTTCTTCCAAGCTTGGACAACACGCAGACAAGCATACCGACACGCCCATATGGTTTTGCCGAGTCTTTCACATCAGCAGATGGGAGGTGA 3036 0.4519 MRAPPPCAFCSFFSFLTFSSFSALVASYTLCRHLLIPSFVLLLLLSCRLLRFLSLFLWRTNMREKTHLKFELLLIFLSGLFSVFVFVGSQANPSQDAPAMEALKKSLNVPESIGWSDSDPCKWDHVGCDEGRVTRIQIGRLGLQGTLPPSLGDLTELQRLELQYNNISGPLPSLKGLGSLQVLLLSNNQFSSIPRDFFTGMSQLQSVEIDNNPFEEWEIPESLRDASSLQNFSANSANITGKVPDFLNADVFPGLTLLHLSFNNLEGGFPSSFSGLQIETLWVNGQTGKLNGTIEFMQNMTSLNEVWLHSNALSGPLPDFSGLKNLEALSLRDNSFIGPVPLSLISLKSLKVVNLTNNLLQGPVPVFNPGVQVDLTKDSNDFCLPTPGDCDPRVNILLSIVKLMGYPQRFAKEWKGNDPCNYWLGITCSNGNITVVNFQRMGLSGTISPEFASLKSLQRIMLADNSLTGTIPGELATLPMLTELDLANNQLYGKVPSFRSNVILNTNGNKDIGKDRSSSTPPGSASPNPSDQGATGENGGISANGGKKSSHVAVIVIAVVGGVFLVSMIGVIVFCLYRMKQKQLSRVQGPNALVIHPRHSGSDNESLKITVAGSSVSVGTASETQTVPGSEAGGDIQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAITGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLIIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDPTIDRNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSCEDIYGIDLDMSLPQALKKWQAYEGGGGDSSSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0760 1011 Pfam Protein kinase domain 659 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0760 1011 MobiDBLite consensus disorder prediction 506 543 - -
Lele27g0760 1011 SMART serkin_6 658 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0760 1011 SUPERFAMILY Protein kinase-like (PK-like) 638 942 IPR011009 -
Lele27g0760 1011 Gene3D Ribonuclease Inhibitor 93 390 IPR032675 -
Lele27g0760 1011 MobiDBLite consensus disorder prediction 973 1000 - -
Lele27g0760 1011 FunFam receptor protein kinase TMK1 619 735 - -
Lele27g0760 1011 SUPERFAMILY L domain-like 395 501 - -
Lele27g0760 1011 ProSiteProfiles Leucine-rich repeat profile. 179 200 IPR001611 GO:0005515
Lele27g0760 1011 Gene3D Transferase(Phosphotransferase) domain 1 736 953 - -
Lele27g0760 1011 PANTHER OSJNBA0070M12.3 PROTEIN 80 1011 - -
Lele27g0760 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Lele27g0760 1011 ProSiteProfiles Protein kinase domain profile. 658 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0760 1011 CDD STKc_IRAK 664 937 - -
Lele27g0760 1011 Pfam Leucine rich repeat 451 491 IPR001611 GO:0005515
Lele27g0760 1011 Pfam Leucine rich repeat N-terminal domain 94 129 IPR013210 -
Lele27g0760 1011 Pfam Leucine rich repeat N-terminal domain 395 429 IPR013210 -
Lele27g0760 1011 FunFam Leucine-rich repeat receptor-like kinase 392 515 - -
Lele27g0760 1011 Gene3D Ribonuclease Inhibitor 392 516 IPR032675 -
Lele27g0760 1011 SUPERFAMILY L domain-like 103 367 - -
Lele27g0760 1011 Gene3D Phosphorylase Kinase; domain 1 619 735 - -
Lele27g0760 1011 SMART LRR_typ_2 252 275 IPR003591 -
Lele27g0760 1011 SMART LRR_typ_2 478 500 IPR003591 -
Lele27g0760 1011 SMART LRR_typ_2 177 200 IPR003591 -
Lele27g0760 1011 SMART LRR_typ_2 154 176 IPR003591 -
Lele27g0760 1011 SMART LRR_typ_2 300 322 IPR003591 -
Lele27g0760 1011 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Lele27g0760 1011 MobiDBLite consensus disorder prediction 971 1011 - -
Lele27g0760 1011 FunFam Receptor-like kinase TMK4 94 388 - -
Lele27g0760 1011 FunFam receptor protein kinase TMK1 736 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0760 Lele-ChrLele27 15713258 15717034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0760 145 940 Receptor kinase-like Gene Family AT5G07280 32.357 5.64e-89 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele27g0760 Pkinase 4.7e-46 CL0016