Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0758 ATGCTGAACTTCTTGAAATTTAAGCACAGCAAAGTCATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAATCTGAAATTAGCAGCCAGGTTGCATCCAACATTTTCATTCATGAAATATCTGCAGGTCCCTCAAGTGACAGCCTCAACAATGATTCAGACCACACAAACACCATAGGATTTCAACTAAATAATGCAGATCCTCTTTCACTTGACTTGACTCTCAGCTTCAATAACAATGATCTAGGCCCGGCCGGGGAATCCATAGGACTCTCATTCTCAAGCACCAGTGAGAGTAGCAATGAACCTGCCTCTCAAACCACATCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGTTCGCAGGCTCTTGGTGGCCACCAGAATGCACACAAGAAGGAAAGAACACTAGCAAAGAGAGCTTTGAGAATGGGGTTTTTCTCTGATAGGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCCTTAGGAATAAAAGCACACTCCTCACTTCACCATGGCTTTTCACCATCAATGGTGAGGCCTTATGAGATTAAAAGCAGTTCAAGATTTGATCAAGGGTATGTTGGAATGCCTATGTTCATGGAGGAAGATGAGGCAGAACTGCTATGGCCTGGTAGTTTCCGTGGGGTTGGAGAGTTAAGTGATAATGATAACACTCATCATCATCATCATCACCACCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTGGCAGAAGTGAATCCAGAAGTACTCCTTGAGCTAGAGGACTCAACACCGGATTTAACATTGAAACTTTGA 852 0.439 MLNFLKFKHSKVMRPNLDLEVEASAENESEISSQVASNIFIHEISAGPSSDSLNNDSDHTNTIGFQLNNADPLSLDLTLSFNNNDLGPAGESIGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKKERTLAKRALRMGFFSDRYASLASLPLHGSFRSLGIKAHSSLHHGFSPSMVRPYEIKSSSRFDQGYVGMPMFMEEDEAELLWPGSFRGVGELSDNDNTHHHHHHHQKFVVTGSSNLSLAEVNPEVLLELEDSTPDLTLKL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0758 283 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 49 210 IPR044246 GO:0009788
Lele27g0758 283 FunFam Zinc finger protein 2 97 166 - -
Lele27g0758 283 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Lele27g0758 283 Gene3D Classic Zinc Finger 97 161 - -
Lele27g0758 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Lele27g0758 283 SUPERFAMILY beta-beta-alpha zinc fingers 117 147 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0758 Lele-ChrLele27 15694670 15696170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0758 102 283 C2H2 Transcription Factor Family AT1G66140 46.948 2.61e-46 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1328 25 9083100 9083915 Lele27g0758 27 15694670 15696170 CCT
Lele25g1315 25 8973583 8975394 Lele27g0758 27 15694670 15696170 CCT
Lele27g0758 27 15694670 15696170 Lele27g0758 27 15694670 15696170 ECH
Lele25g1328 25 9083100 9083915 Lele27g0758 27 15694670 15696170 hybridization
Lele26g1339 26 9056498 9057319 Lele27g0758 27 15694670 15696170 hybridization