Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0755 ATGCCCTTGGAAGCAGGGATTTTCATTGAGCCACCACCTGCTTCTTCTTCTTCTTCGTCTCCTCCTGATCTTTCTCTTCACATAAGCCCTCCTTCAACCTCTTCTTCTTTGATTTGCAGCAACAACAACTATGAAGCTCGGCACTACAGTAAAAATTCTTCTTCTTCTTCTCTATCTGTCTCTCAATCTCTTCATGCCCACACTGAACTTTCTCTCGGAAGCAATTTCACTTGTGCAACCACGCAAGAACCAGTGACCCATCACCTTAACAAAAACAGCAACACCAACCCTTATTTTCAGACCCACCACCATCACCATTTGATCCACCACCACCACCAGAATCCGAATTTGAATAACTATGGAGTCTCATTGCTCGATGTGTCTCCTTCTTCATCCGACGGTTTGAGGCCCATCAAAGGGATTCCGGTCTATCATAACCGTTCCTTCCCTTTCTTGCCGGCGGTGGACCACAACCACAAGGATAATCATCATCAGCAGCAGCAGCAAACCAAGATGTGCTTCTACAGTCCTTCTTTCCCTTCTTCTCCTTCTCCTTCGGGCTCTCCCTACATGGCGGTGGCAGCCGCAGGGTTGGATCCCGTGTCGGCGGCGTATAGGGCGGGTGCCACCGGCAGGTTTAATGGGATTTCCGGAGATGCTTTCAAATCTCATCATCATCATCAGTATGGGATGGTCGGGCCATCTTCACATGACGCGCCTGCAAGCAGTGGGCTCATGAGATCCAGATTCTTGCCTAAGCTTCCAACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACCACCCTCCACGCCCGTTTCGTTCACGCCGTCGAGCTTCTCGGCGGCCATGAAAGAGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCATCAGGCCAATCAGACGGGTCTGGAGAGGATGACATATTTGCAGATCAAAGCGGAAGCAGAACAGATAGGTCAGTGCAGCATGATATGGACTACTCTTCAACCACCACTACTCTTTGGAGCAATTCTTCAAGTAGTAGAGAGCCATGGCTTCAAAATGGTACCAAAGACATTGACCCTCTGAGACCACCTCCCTTCCAGACACCAACACTATCATCATCAGGCCATCAAATTCAGGAGTGTGATTCAAGGCATGTGAAGAACAACAGCATAGCAAGCTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTAGGGAGACCAGATTGGAATGGCAAATGA 1323 0.4853 MPLEAGIFIEPPPASSSSSSPPDLSLHISPPSTSSSLICSNNNYEARHYSKNSSSSSLSVSQSLHAHTELSLGSNFTCATTQEPVTHHLNKNSNTNPYFQTHHHHHLIHHHHQNPNLNNYGVSLLDVSPSSSDGLRPIKGIPVYHNRSFPFLPAVDHNHKDNHHQQQQQTKMCFYSPSFPSSPSPSGSPYMAVAAAGLDPVSAAYRAGATGRFNGISGDAFKSHHHHQYGMVGPSSHDAPASSGLMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDIFADQSGSRTDRSVQHDMDYSSTTTTLWSNSSSSREPWLQNGTKDIDPLRPPPFQTPTLSSSGHQIQECDSRHVKNNSIASSNLECKNPSLEFTLGRPDWNGK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0755 440 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Lele27g0755 440 FunFam Myb family transcription factor 261 319 - -
Lele27g0755 440 Gene3D - 262 319 - -
Lele27g0755 440 MobiDBLite consensus disorder prediction 318 333 - -
Lele27g0755 440 MobiDBLite consensus disorder prediction 318 440 - -
Lele27g0755 440 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Lele27g0755 440 MobiDBLite consensus disorder prediction 393 426 - -
Lele27g0755 440 MobiDBLite consensus disorder prediction 1 34 - -
Lele27g0755 440 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 263 316 IPR006447 GO:0003677
Lele27g0755 440 MobiDBLite consensus disorder prediction 19 34 - -
Lele27g0755 440 MobiDBLite consensus disorder prediction 354 377 - -
Lele27g0755 440 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 22 439 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0755 Lele-ChrLele27 15666727 15671124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0755 1 440 G2-like Transcription Factor Family AT5G16560 41.737 6.31e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele27g0755 Myb_DNA-binding 2.2e-05 CL0123