Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0741 ATGGCCATTCATGATCAAAATGGAGTTACCAGATCTCACGGCAGTATTCCAGTAGGAAATGGAGCATCTTTGAACTCTGGACTTCATTCTGTTGCACGGGTTCATCTAAATGATCAGTTTTCTTGTGGGAATGACTATGCTCCAAAGGCAAGGAAACCATATACTATCACAAAACAAAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTTGAAGCTTTAAAGCTGTACGGCCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTACAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTATAAGGTTCTTCGTGATCCTTGTGGAAACAATACGAACTCGATGGAGTCCATTGAAATTCCACCCCCACGTCCGAAACGAAAGCCTATGCATCCTTACCCTCGTAAGCTGGTGGAGCTCCCGAACAAAGAGGCTTCCATACCAAAACGGCTAATGATGATGTCTAATTCTCTGAAATCATCAGATTTTGACCAAGAAAACCAATCTCCCAAGTCAGTATTATCTGCAGTTGGTTCAGACACCCTTGGTTCCTCTGATTCAGACACACCAAATGGAAGCTCATCCCCAATTTCATCCAATAGTGCTGTTCATACCAACAGCTTTGTAGTTGCTGAACCTGAAAACCTACAATTGGAGGAGGAAGGGTGCCCACCATCGTCTGGACTAAATGCTGATCCTACTCTTGATAAGCAACCACTTATGAAGCATGAACTTCTCCAGAAAGAAAGCATATCCACCAAAGAAGATGCTGCAGAAGAATCATCTGGTCGGATTCTGAAGCTTTTTGGGACGACTTTGTTGGTAACAGATAACTGCTGGCAATCCTCTCCAACAATGCAAGCATGCAAGTTGATTCACTCAAAAGTTGTTCCATGTTGGAGTATTCCCCACATTAGATCACTGCACAAGAAGGTGCCGGAAGGAAAACAGCAACCAGACTACAATTTTAGGGAAATTGAACATGTAGAAGTTAAAAATGAAGGATCTTTGACTAATCCAAGCACTAGCTCTTGTGTAAATAAGGATGAAAAATCAGATATGGAAGCCAAAAGGGAAACTAAAGCTATATTTGATCTGAAGAAGTGTGGAAAAGGGTTTGTACCATATAAGAGGTGTATTGCAGAGAGGGAAAACAACCAGGCCTCATCAGTAACTAAAGTGGAGAGGGAAGAACAACGAATTCGCCTTTCCTTGTAA 1233 0.4209 MAIHDQNGVTRSHGSIPVGNGASLNSGLHSVARVHLNDQFSCGNDYAPKARKPYTITKQRERWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFYKVLRDPCGNNTNSMESIEIPPPRPKRKPMHPYPRKLVELPNKEASIPKRLMMMSNSLKSSDFDQENQSPKSVLSAVGSDTLGSSDSDTPNGSSSPISSNSAVHTNSFVVAEPENLQLEEEGCPPSSGLNADPTLDKQPLMKHELLQKESISTKEDAAEESSGRILKLFGTTLLVTDNCWQSSPTMQACKLIHSKVVPCWSIPHIRSLHKKVPEGKQQPDYNFREIEHVEVKNEGSLTNPSTSSCVNKDEKSDMEAKRETKAIFDLKKCGKGFVPYKRCIAERENNQASSVTKVEREEQRIRLSL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0741 410 MobiDBLite consensus disorder prediction 165 206 - -
Lele27g0741 410 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Lele27g0741 410 SUPERFAMILY Homeodomain-like 54 107 IPR009057 -
Lele27g0741 410 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Lele27g0741 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Lele27g0741 410 MobiDBLite consensus disorder prediction 116 139 - -
Lele27g0741 410 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Lele27g0741 410 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Lele27g0741 410 PANTHER SWI/SNF COMPLEX-RELATED 35 359 - -
Lele27g0741 410 MobiDBLite consensus disorder prediction 394 410 - -
Lele27g0741 410 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Lele27g0741 410 MobiDBLite consensus disorder prediction 390 410 - -
Lele27g0741 410 SMART sant 59 107 IPR001005 -
Lele27g0741 410 CDD SANT 62 105 IPR001005 -
Lele27g0741 410 Gene3D - 62 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0741 Lele-ChrLele27 15538922 15541328 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g0741 Myb_DNA-binding 1.2e-13 CL0123