Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0740 ATGAGGAGGCAGATGATGAACAAGAAGACACTGGTTGGAAATACATTCTTGGTGATGCGTTCAGTGTTGTTCATCTCTATTTATAACCATGAATCTTTTGCTCCTGATTTCTGTGTTATCTTCGTCTATATGCTTCCACAAGTCGGCGTGTTCTATCCAAACAACAGGGGTGCTCTGTTTACTGCACTTATTATCGTATACGCGCTAACGTCTGGAATTGCAGGCTACTCTGCAGCATGCCAACACATGCTGGGTTTGAGAGGCCTGAGAAATCTTGGGCATTATTCTCCGTGTGAATCAAATAACTTCAATATCTCTATCCCGGATAATATAAATGTGCTTCTCATTCTAGTTGTCAGTGTCCTCATAGTAGAAACTGTCACCAAACAATATTTGGTTGTGGTTTCAGTTTCTTCTCTCGAGTCTCATTCTTGCAAAGAAATGAAACTATACTACATAAAGCACGGAATTCAACGAAGTACGGTAATTGACGATGTGGTTTGCCAGGTGAAAACTTCGATATTGACTGGAAGCCTATTCTATGGACCTTTGTTTATGACGTTCTGCGTCCTCAACACTGTTGCACTTGCCTATAGCTCCACTGCAGCACTGCCTTTTGGAACAATTGTTGTTATTTTCTTCAAATGGATTTTTGTGACCCCACCTATGTTAATATTGGGTGGGATTGCTGGGCACAATAGCAAGTCAGAGCTTCAAGCTCCTTGTCGCTTCTTCATATATGGCTACAGCTTTTATTTCTATCATGCAAAGATCAGATATGTCTGGCTTTGTGCAAACATCTTTCTTCTTTGGATACATGGCTTGCATTTCCTATGGTCTCTTCCTCATGCTTGGAGCTTTTGCTCTTTCCGTCTCTTCTTGCCTTCACCCTTCTCTCTCTCTCTTGAGCTCTCAGTGAAGTCCATGGAAATCTCACTTGCTCTGTTTTTCACACTAACACTTCTGCTCACACTTTCTTCAACAGTCACTTCCCATTACTCCTCCTTCTCCTCCAATTCTTCTTCTGCTCAGCATTCTTCATCTTCCTCTTCGCCCTCCGAATGGCGATCTGCGCACGCTACTTACTACGCCGCCGCAGATCCCAGGGACGCGGTAGGCGGCGCGTGTGGATATGGTGACCTTGTCAAAGCTGGTTACGGCATGGGCACTGTGGGTCTCAGTGAGTCTCTCTTTGAACGGGGCCAGATCTGTGGTGCCTGCTTCGAACTCCGCTGCGTCGATGACCTTCGCTGGTGTATCCCAGGAACCTCCATTATCGTCACTGCAACGAATTTCTGTGCCCCCAACTACGGCTTCACCGCCGAGGGAGGTGGCCGTTGTAACCCTCCCAACCAGCATTTCGTGCTCCCGATTGAAGCTTTCGAGAAGATCGCTATTTGGAAAGCTGGGAACATGCCGGTTCAGTATCGCAGGATAAAGTGCCGAAAGCAAGGAGGAATGCGTTTTACGGTCACAGGTTCTGGGATTTATATATCACTGCTGATCAGCAATGTAGCAGGCGTTGGGGACATAGTGGCGGTGAAGGTGAAGGGCTCAAGAACAGGTTGGCTTCCAATGGGTCGAAATTGGGGCCAAAACTGGCATGTGAATGCATTACTACAGAATCAACCTCTTTCATTTGAGGTCACTGGTAGTGATGGCCTAACAGTGACGTCTTACAATGTTGCTCCCAAAGATTGGAGCTTCGGACAAACCTTTGAAGGCAAGCAATTTGAGTCATAA 1743 0.4607 MRRQMMNKKTLVGNTFLVMRSVLFISIYNHESFAPDFCVIFVYMLPQVGVFYPNNRGALFTALIIVYALTSGIAGYSAACQHMLGLRGLRNLGHYSPCESNNFNISIPDNINVLLILVVSVLIVETVTKQYLVVVSVSSLESHSCKEMKLYYIKHGIQRSTVIDDVVCQVKTSILTGSLFYGPLFMTFCVLNTVALAYSSTAALPFGTIVVIFFKWIFVTPPMLILGGIAGHNSKSELQAPCRFFIYGYSFYFYHAKIRYVWLCANIFLLWIHGLHFLWSLPHAWSFCSFRLFLPSPFSLSLELSVKSMEISLALFFTLTLLLTLSSTVTSHYSSFSSNSSSAQHSSSSSSPSEWRSAHATYYAAADPRDAVGGACGYGDLVKAGYGMGTVGLSESLFERGQICGACFELRCVDDLRWCIPGTSIIVTATNFCAPNYGFTAEGGGRCNPPNQHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKQGGMRFTVTGSGIYISLLISNVAGVGDIVAVKVKGSRTGWLPMGRNWGQNWHVNALLQNQPLSFEVTGSDGLTVTSYNVAPKDWSFGQTFEGKQFES 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0740 580 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 496 575 IPR007117 -
Lele27g0740 580 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 373 486 IPR007112 -
Lele27g0740 580 PRINTS Expansin signature 425 435 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 385 399 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 532 553 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 561 577 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 461 474 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 485 497 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 444 461 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 497 518 IPR002963 GO:0009664
Lele27g0740 580 PRINTS Expansin signature 412 423 IPR002963 GO:0009664
Lele27g0740 580 SMART dpbb_1 390 476 IPR007112 -
Lele27g0740 580 SUPERFAMILY Barwin-like endoglucanases 354 504 IPR036908 -
Lele27g0740 580 Gene3D - 487 578 IPR036749 -
Lele27g0740 580 Pfam Expansin C-terminal domain 487 564 IPR007117 -
Lele27g0740 580 Gene3D - 338 482 IPR036908 -
Lele27g0740 580 PANTHER EXPANSIN-A15 318 578 IPR002963 GO:0009664
Lele27g0740 580 SUPERFAMILY PHL pollen allergen 483 575 IPR036749 -
Lele27g0740 580 Pfam Lytic transglycolase 391 476 IPR009009 -
Lele27g0740 580 Pfam Endomembrane protein 70 38 246 IPR004240 GO:0016020
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 469 485 IPR007118 GO:0005576
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 523 537 IPR007118 GO:0005576
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 394 412 IPR007118 GO:0005576
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 561 575 IPR007118 GO:0005576
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 372 390 IPR007118 GO:0005576
Lele27g0740 580 PRINTS Expansin/Lol pI family signature 354 369 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0740 Lele-ChrLele27 15531210 15537535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0740 354 580 Expansin Gene Family AT3G03220 84.141 8.65e-146 419