Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0736 ATGGCACCAGTTTCGTTTCCTCCAGGTTTCAGGTTCCACCCTACAGATGAAGAGCTGGTAGCTTACTATCTCAAAAGAAAGATTAATGGCCAAAAGATTGAGTTAGAAATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCGCTGTTACCGGGGAAGGACTTGGAGTGGTATTTCTTCAGTCCACGAGATAGGAAGTATCCGAATGGATCAAGAACGAACCGAGCGACGAGATGTGGTTATTGGAAGGCGACAGGGAAAGATAGGAAAGTGAATTCACAGAGTAGAGCAGTAGGGATGAAGAAAACCCTAGTTTACTATCGAGGAAGGGCCCCTCATGGCTCTCGCACTGGTTGGGTCATGCATGAGTATCGTCTTCACGAACGAGAATGTGATCCTGCTTCTACCGCCATGCAGGAGGCATATTCGCTGTGTCGTGTGTTCAAGAAGAGCGCAGTGATAAGCCCACCAAAGACAGAAGAGCAGTACGTGATGAGGAGCAATAGCCATGGGAATTACCTCCACCATCATCATCAACAACATCACCAGATGGGTAGTGATCAGAACTCATCAACCATGAATGAGCTTTACTCTGAAGGAAGAGGCGAAGACTTGGACAGCTCAAATAATTACTACATGCACCACCAGCACCACCTAAATAATGTCAATTCTTGTGGAGGAATCACTCAACAACATGCGAATAATCCTAGTTGGTCTCACTTCTTGTCTGATGATCCATTCTTAAGCCTCCCAACAACTTCTTCCTTCCCCAGCTATGGAGCCGCCTGCATATCCTATCCTCCGTCCAAGGTGGACATAGCTTTAGAATGTGCAAGGATGCAGAATAGGTTCAGTATGCCTCCATTGGAGGTGGAGGACTTCCCTCAAGTTGGGATTTCTGAACTGAAGATGCCACAACAACAACAACAACCTGATCATCATTCTGGTGCCATTATTCATGGAAGCAGAACTGAAACAGCAACAACAGATATTTTGCAGGAGATTCTATCAGTAGCTCATGCTTCTCAGGAACTCATTAATAATCAGACCTCAAACTATTTACCCACCACATGGGGCGGCGGCGGCGGCGGCAACGAAAACTATGCTCCTCGTGAAGAAGATGACGATGACTTCACTTTCATGGTGGGAAGAGGAAGTGGTGATGATCAGAACTATGACTACAACCACCATGTGAGTGACTGGAGTTCCATGATCAGAGGCTTTAATAATGAGACTACTACATGGGAAGATCATCAGAACACAATTAGGTCAATAGAGATTGCAGATCTGGATTATGAGTTCAAGGCAGAGAGTATGGTCGAGAACTTGAGATGGGTTGGAATGTCGAGCAAAAATATGGACAAGAGCTTTATGGAAGATCAAAAGATTGTTCCTATTGAGGATATTACAAATTTCCAAATAAACAAGAAAGACAATGAGGTGCAAGAATCTGTGCAGCAGCAAAGCAACAACATCAATGACTTCTCATCGGGATTCATCAATTATGATGAACCAAATGAGAACTTCATAGATGAAGGCACCCCCATGGATGACTATTCAAGCTCTCCAAGCTGCTTTGAGGTTGTTGAGGAAGTAAAAGTTACCCATGGAATGTTTGTGGCAAGTCGCCAAGCAGCCGAAACATTCTTTCACCAGATAGTTCCTTCACAAACCATCAAGGTTCATCTCAACCCAGTAATGGCAACAAACACTAATCTTACAGAAGAAAATGCAGAAACAGCACAGACTACAGAAACACTGAGAATGGAGAACCAAGGGCCCTATTTCACAAAACTGAAAGACTACACGATGGGAAAGCTAATAATGAAGCCTTCAAAGATTTCTAGTGCTATTATGTTCATATTTGCATTTCTCTTGATGCATTTTGCTTCATATTTGAGGGAGCATGAACAAATCTGGAAACTAGACCCTCAAAATGAAGATGTCGAGGAGAAATATTGCTCTAGTGCAAGTAGCAGCAAGAAGAAACTGCCATGGAATGAGGAAGAAAGGGTTTGGTTTGTTGGTATCAAAAGTGGAAGAGGGTTTAGTGTGGTGTTGAAGAAGGTAGGGATCTTCCTTACAATTTCTTTGGCCCTTTGCACCATGTGGGCTAACCACTTCACAGTTGATTGA 2157 0.4367 MAPVSFPPGFRFHPTDEELVAYYLKRKINGQKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATRCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECDPASTAMQEAYSLCRVFKKSAVISPPKTEEQYVMRSNSHGNYLHHHHQQHHQMGSDQNSSTMNELYSEGRGEDLDSSNNYYMHHQHHLNNVNSCGGITQQHANNPSWSHFLSDDPFLSLPTTSSFPSYGAACISYPPSKVDIALECARMQNRFSMPPLEVEDFPQVGISELKMPQQQQQPDHHSGAIIHGSRTETATTDILQEILSVAHASQELINNQTSNYLPTTWGGGGGGNENYAPREEDDDDFTFMVGRGSGDDQNYDYNHHVSDWSSMIRGFNNETTTWEDHQNTIRSIEIADLDYEFKAESMVENLRWVGMSSKNMDKSFMEDQKIVPIEDITNFQINKKDNEVQESVQQQSNNINDFSSGFINYDEPNENFIDEGTPMDDYSSSPSCFEVVEEVKVTHGMFVASRQAAETFFHQIVPSQTIKVHLNPVMATNTNLTEENAETAQTTETLRMENQGPYFTKLKDYTMGKLIMKPSKISSAIMFIFAFLLMHFASYLREHEQIWKLDPQNEDVEEKYCSSASSSKKKLPWNEEERVWFVGIKSGRGFSVVLKKVGIFLTISLALCTMWANHFTVD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0736 718 MobiDBLite consensus disorder prediction 360 384 - -
Lele27g0736 718 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Lele27g0736 718 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Lele27g0736 718 MobiDBLite consensus disorder prediction 182 208 - -
Lele27g0736 718 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 223 - -
Lele27g0736 718 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Lele27g0736 718 FunFam Nac domain-containing protein 86 15 160 - -
Lele27g0736 718 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0736 Lele-ChrLele27 15480576 15484949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0736 1 634 NAC Transcription Factor Family AT1G65910 43.492 1.72e-153 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele27g0736 NAM 1.2e-40 No_clan