Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0722 ATGATTCACGGTAGAACGAAAAAAGAAAGAATAAACAGCTTGGTCGACATTGTGTTCTCTTGGAATATTCAAGATGCTCTCAACGATAATCTTTATAAAAACAAGGTGCCAAAGATCCCATTGACGTTTTTGACAGCAACAGAATACATGAAATCCTTTATTCCTTCACTGATTGAGGAAACACACAGTGATTTATGTTCAAGCTTGAAGGACATTTCCAAAGCCCCTACTTGTGAAATCCTGACATATAAGAGGTTGAAGAAGAGGCAAGATTTTGTTTATGAGGCGACGTTGAATAACGGTGGACAATATGAACCTGAATCTGGAGATCTCATCGCCATCACTGATAGTAGGCCAAAACGCATTGAAGACTTGAACAAACCCACAAGATACTATCATATTGCTTATGTTCAAGGCTCAAACGATGGTAAGATCACATTAGTTTCATCAAAGAACATGGAGATTGAACCAGACATGGGGAACAGGAAGGCACAAAAGCTTTATGCTGCTTATCTTATAAACTTGACAACCAATATTCGTATTTGGAGGGCCTTGAACTCGCAGCTAGAAGGCGCAAACTGTAATATCATTGGGAAAGTTCTGCAACCTGACACATTGATTGGGAAGAGCAGTCACGTTTGCCCTTCTTTAGAGCGCCAAAATACCGACATTTCTATTACAACAAACATAATTAGGTCTCAGAATCTGAATAAATGTCAGAAAGATGCTGTATTAAGTAGTGTTCAAATGAGGAAATGTCATCACAATCACACTGTGAAACTTATTTGGGGCCCTCCTGGGACTGGAAAAACAAAGACAGTTGTTTCCATGCTTTTTTCCTTGTTCAAACTAAAAACAAGAACATTAACATGCGCACCAACAAATATTGCTGTGTTGGAAGTGGCATCTCGCTTGCGTAATTTACTTAAAGATCAACTTCAGCTTGATTCTTATGGGCTGGGTGACATAGTGCTTTTTGGGAATAATTCTCGAATGAAAGTTGATAATTATTGGGGCCTTCCCGATATCTTTCTTGATTATCGTGTCGATAGGCTTGAGCAGTGTCTTAATCCATTGACCGGATGGGAGCCTAACTTGGAATCAATGATCAATTTACTTGAGAAACCTCATGAGCAGTATCTTTTATCTAACCTTGATGCAAAGTATGAGGAGGTTAATGATCTAATGTCATTAGAAGAATTTACTAAGCTTAATTACAGCAGTGTAGAGCAAGCATATCTTTCTCAGAAGCAACTTGAAGATAAAGATGATCATATGACATTGGAGCAATTTGTGAAGATGAGATATAGTTACATTAATGACCAATACCTTTCTTATAATGCTGAAGTTCAGTTTATAAAGAGGAGGTTCAGTTTCATAGGTAAGAATCTCAAGTCCTGCTTGCAGACATTATACTCACAACTACCAACTTACCTTGTTCCTTTTAATGTGGCAAAGAAGATGTGTAGAGCACTGAATTTGCTAGAAACCCTTCAAAATTGTTTGCGTCGAAATGAGTTCATAGAAATTCCCAATTTTAATGTTGATGGAAAAGGAAACTCCGTCGGCCAACCAGAAATTCCAATTGAGGAGCCTATCCATGATTCACTTATGCCCATGGGAACAGATATTCCAATAAAAGATGTCACATTTTGCTTTGGAAGGTTAAGATTGGAAAGAGACGAGTTTCTTGGGATCCTTAGATCACTCGCTTTGTCAAGTTCACTTCGACGACTTAAAAGGCAGTATGCAACAAAAGATTTTTGCTTGAAGAAGGCATGCCTAATTTTCTGTACTGCTTCGGGTTCTATCAAATTGTTCACTGAAGAAATGACACATATACCCTTTGTAGTTATAGATGAAGCAGCTCAGCTCAAAGAGTGTGAGTCAGCAATACCTCTGCAACTTCCAGGTGCAAGGCATGCTGTTCTCATAGGTGATGAGAGGCAACTTCCTGCAATGGTTAAGAGCAAGATTTCTGATGAAGCTGGATTTGGAAGAAGCATGTTTGAGAGGCTGGTGGTGTTGGGATACAATAAACATCTACTCAATGTCCAGTTTAGAATGCATCCATCCATAAGCTTATTCCCCAATAGGGAATTCTATGAAGGGAAACTTGTGGACGGCATGAATGTCATAGATTCCAGCTATAGGAAACGCTTTCTTGAGAGAAAAATGTTTGGCTCCTTTTCTTTTATAAATATAGCTAAGGGCAAAGAGCAATTTGGTCATGGACAGAGCTTGAAGAACACGGTGGAGGTTTCTGCCATCACAGAGATTATAAAAGGGCTTCACAAAGAGTTCCTGAGCAACAGAAGGAAAGTCAGCATAGGAGTGATATCTCCATATAAGGCACAAGTCCATGAAATCCAAGAGAAAATGAAGAAAACCAATTTGGTTTCAGATGGTGACTTCTCTGTGAGTGTTCGTTCTGTTGATGGCTTTCAAGGTGGTGAAGAAGATATCATAATGATCTCCACTGTCAGATCTAACAAGAGTGGAAATGTGGGGTTCCTTTCTAATAAACAAAGAGCCAATGTGGCTCTTACTCGTGCTAGGCATTGTCTGTGGATATTGGGGAATGCAGAAACTCTAAAACAGAGTCGTTCTGTTTGGAAAAAGTTAGTAAATGATGCTAAGCAAAGAGGGTGCTTCCATAATGCAGATGAGGACAAGAACTTGGCTGGAGCCATTAAGGACGCCATACTTGAGCTTGAACTTGTTGATGAATCAAAGTCACCTTTTAAGTCACTCAGTATAAGGGACAAGAAAGACAAGTCAGAAACGGGTTCTACAAGTTCCAGGTAA 2808 0.3925 MIHGRTKKERINSLVDIVFSWNIQDALNDNLYKNKVPKIPLTFLTATEYMKSFIPSLIEETHSDLCSSLKDISKAPTCEILTYKRLKKRQDFVYEATLNNGGQYEPESGDLIAITDSRPKRIEDLNKPTRYYHIAYVQGSNDGKITLVSSKNMEIEPDMGNRKAQKLYAAYLINLTTNIRIWRALNSQLEGANCNIIGKVLQPDTLIGKSSHVCPSLERQNTDISITTNIIRSQNLNKCQKDAVLSSVQMRKCHHNHTVKLIWGPPGTGKTKTVVSMLFSLFKLKTRTLTCAPTNIAVLEVASRLRNLLKDQLQLDSYGLGDIVLFGNNSRMKVDNYWGLPDIFLDYRVDRLEQCLNPLTGWEPNLESMINLLEKPHEQYLLSNLDAKYEEVNDLMSLEEFTKLNYSSVEQAYLSQKQLEDKDDHMTLEQFVKMRYSYINDQYLSYNAEVQFIKRRFSFIGKNLKSCLQTLYSQLPTYLVPFNVAKKMCRALNLLETLQNCLRRNEFIEIPNFNVDGKGNSVGQPEIPIEEPIHDSLMPMGTDIPIKDVTFCFGRLRLERDEFLGILRSLALSSSLRRLKRQYATKDFCLKKACLIFCTASGSIKLFTEEMTHIPFVVIDEAAQLKECESAIPLQLPGARHAVLIGDERQLPAMVKSKISDEAGFGRSMFERLVVLGYNKHLLNVQFRMHPSISLFPNREFYEGKLVDGMNVIDSSYRKRFLERKMFGSFSFINIAKGKEQFGHGQSLKNTVEVSAITEIIKGLHKEFLSNRRKVSIGVISPYKAQVHEIQEKMKKTNLVSDGDFSVSVRSVDGFQGGEEDIIMISTVRSNKSGNVGFLSNKQRANVALTRARHCLWILGNAETLKQSRSVWKKLVNDAKQRGCFHNADEDKNLAGAIKDAILELELVDESKSPFKSLSIRDKKDKSETGSTSSR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0722 935 FunFam P-loop containing nucleoside triphosphate hydrolase 687 895 - -
Lele27g0722 935 Gene3D - 153 489 IPR027417 -
Lele27g0722 935 Pfam Domain of unknown function (DUF6469) 103 187 IPR045529 -
Lele27g0722 935 Pfam AAA domain 236 330 IPR041677 GO:0004386
Lele27g0722 935 Pfam AAA domain 576 658 IPR041677 GO:0004386
Lele27g0722 935 Pfam AAA domain 666 862 IPR041679 -
Lele27g0722 935 PANTHER DNA2/NAM7 HELICASE FAMILY 82 924 IPR045055 -
Lele27g0722 935 Gene3D - 555 686 IPR027417 -
Lele27g0722 935 CDD SF1_C_Upf1 689 880 IPR041679 -
Lele27g0722 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 875 IPR027417 -
Lele27g0722 935 Gene3D - 688 900 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0722 Lele-ChrLele27 15375684 15380462 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0722 27 15375684 15380462 Lele01g1072 01 6265419 6268350 CCT
Lele27g0722 27 15375684 15380462 Lele02g1098 02 6945959 6948547 CCT
Lele27g0722 27 15375684 15380462 Lele03g1077 03 6258789 6263863 CCT
Lele27g0722 27 15375684 15380462 Lele04g1086 04 6811529 6814602 CCT
Lele25g1360 25 9429492 9430924 Lele27g0722 27 15375684 15380462 hybridization
Lele26g1367 26 9332148 9338237 Lele27g0722 27 15375684 15380462 hybridization