Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0718 ATGAGATACTCCAACAGAGCCTTCTTTGCTGATAATCAAACCATTAATATTAGGCCCTTCTTGAAACAAGGGGGAGGTTCAAGCAAGAAGAAGGCCATTATTGGGGGAGTGGTTGGAGGTGTCTCTTTTCTTTTGATTCTCCTTGCATTATTTGCTTTGTACATACGATCAAAGTCTTCCAAGAGGATTCATAGAGGTGATCTTTTAGGAGCAACTGAATTGAAAGGCCCAATTAATTATAGGTACAACGATCTTAAGAAGGCCACGAAAAATTTCAGTAAAGAAAATAAGCTAGGAGAAGGAGGCTTCGGTGATGTATACAAGGGCACTCTAAAAAATGGAAAAGTAGTTGCTGTCAAGAAATTGGCTTTAGGCCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAACTGATCAGTAACGTTCATCATCGCAATCTTGTTCGGCTTCTTGGATGTTGCAGTAAAGGACAAGAGAGGCTACTTGTTTATGAATACATGAGAAACAACAATGTTGGCACATTCTTGTTTGGCAAAAACAAAGGCACTCTCAATTGGAAGCAACGATATAATATAATTTTAGGCACGGCAAAGGGTTTGGCCTATTTGCATGAAGAATTTCATGTTTGTATCATACATAGAGATATAAAGAGCAGTAACATTCTCCTGGATGATGATTTAAAACCTAAAATTGCTGATTTTGGATTGGCAAGGCTTCTCCCAAATGACTTATCTCATCTCAACACAAAATTTGCAGGAACAATGGGATATACGGCACCTGAATATGCAATGCATGGACAACTATCAGAGAAGGCCGACACTTATAGTTTTGGTGTTGTAGTCTTAGAAATTATAAGTGGACACAAGAGTGGTGAATCAAAGGATGATAAAGAAGGCGAATTCCTCCTTCAAAGAGCTTGGAAACTCTTTGATAAAGGCATGCATTTAGAGTTTGTGGACAAAACCTTAGACCCTAGTGAGTACGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCTCCTGCAGCGAGGCCAACAATGTCTGAAGTTGTAATTATGCTCAAAGGCCAGGGTATAATGGAGAACAGGAGACCAACTATGCCAGTGTATGTGGATCCTAATTTCAATCCCAGAAGAGACTCTTCAACCTCTTATAACTCATCTTCCTCGAATGCCACTGCCTCCACTGTTGTTCTATCTGGAAGGTGA 1236 0.3956 MRYSNRAFFADNQTINIRPFLKQGGGSSKKKAIIGGVVGGVSFLLILLALFALYIRSKSSKRIHRGDLLGATELKGPINYRYNDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCSKGQERLLVYEYMRNNNVGTFLFGKNKGTLNWKQRYNIILGTAKGLAYLHEEFHVCIIHRDIKSSNILLDDDLKPKIADFGLARLLPNDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSFGVVVLEIISGHKSGESKDDKEGEFLLQRAWKLFDKGMHLEFVDKTLDPSEYDAEEVKKIIEIALLCTQASPAARPTMSEVVIMLKGQGIMENRRPTMPVYVDPNFNPRRDSSTSYNSSSSNATASTVVLSGR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0718 411 CDD STKc_IRAK 98 365 - -
Lele27g0718 411 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 23 396 - -
Lele27g0718 411 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Lele27g0718 411 FunFam Cysteine-rich receptor-like protein kinase 2 57 168 - -
Lele27g0718 411 MobiDBLite consensus disorder prediction 380 411 - -
Lele27g0718 411 ProSiteProfiles Protein kinase domain profile. 92 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0718 411 Gene3D Transferase(Phosphotransferase) domain 1 169 376 - -
Lele27g0718 411 FunFam Cysteine-rich receptor-like protein kinase 2 169 371 - -
Lele27g0718 411 SUPERFAMILY Protein kinase-like (PK-like) 77 394 IPR011009 -
Lele27g0718 411 Gene3D Phosphorylase Kinase; domain 1 56 168 - -
Lele27g0718 411 SMART serkin_6 92 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0718 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lele27g0718 411 Pfam Protein tyrosine and serine/threonine kinase 94 361 IPR001245 GO:0004672|GO:0006468
Lele27g0718 411 MobiDBLite consensus disorder prediction 385 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0718 Lele-ChrLele27 15320130 15322838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0718 14 410 Receptor kinase-like Gene Family AT1G56120 45.980 4.70e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele27g0718 PK_Tyr_Ser-Thr 2.6e-51 CL0016