Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0715 ATGCTTCAGCATTCTCATCTCCTTACCTTATTTACTTTCATATTTTGGTCATCCGGTGCTCTTAACGGCGTCCTTTCAGATCCACAGACTCATATTCTTACCATCGGCTGCACCCCATTCACCCAGTTCGTCGTTTCCGACTTGTCTGTCTTCGTTGACAACCTAAACGCAACATTTCGAGATGTCAGAGAACAAGTTAGAGACCAAAACAAGCACTTCGTCACGGTTCAGGAAAGTGGTGGAGGAAGTCCCGTATCCACTCTTTTTCAGTGCAGAAACTACCTTTCCATCGCCGATTGTCTAGCGTGCTTCGATGTAGCTGCCGTCCTAGTCCGCAGCTGCCCCGCTGGAGCTCCCGGTGGCCACGTTGTCTACGACGGCTGCTTCCTCAGGTATGATGCAAGTCCTTTCTTTGACCGGGCGACGGATACTTTCAATGCTGCACTGTGTGGGAATAAAACTACAGAAGAAGCCACTGCATTTACCTCAGCTGTGCAAAAATTGCTCATGAATCTCCAAAAAGAAACACCAACAATCCCTGGTTTTGTCGCAGCCACAAAGACACAAGTGCCTAATAATGGTCCAACTATTTATGCCTTTGTTCAGTGTACAGAAACTATCTCACAAATTGGATGCCTCAATTGCTTAAGTGTTGGATACAGAAATATGCAGACATGTCTTCCCACTTCAGATGGTAGAGCTTTTGATCAGGGCTGTTTCATGAGATACTCCACAACTTCCTTCTTTCCTGATAACTACCAGATTATTCATGTCACTCCCATAATGGTGGATAAACAAGATTCAAGCAAAAAGGGCCCCATCATCGGTGGAGTTGTTGGAGGAGTATTACTGCTTGTTTTGGTTGCCCTTGCACTTTTTGTTTGGACTAAACCACCCAAAAGCCCTAAAAGAGTTCTGGCTGGAGGAAACATAACTGGTGTAAGCGAGTTGAAAGGTGCAATTAATTACAGTTACATGGATTTGAAGTTTGCAACCAAAAATTTTAGTGTAGAAAATAAACTTGGAGAGGGAGGATTTGGTGCAGTGTACAAGGGAACTTTGAAGAACGGGAAAATAGTTGCAGTAAAAAAATTGACTTTACGCCAATCCAATAAAGTGGAGGAAGAATTTGAGAGAGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATATTGCAGTAAAGGCAATGAGAGAATTCTTGTTTATGAATACATGAAAAACACCAGCCTCGACAAATTCTTATTTGGTAAAATGAAAGATCCTCTTAATTGGAAGCAACGATATGATATAATTTTAGGCACTGCAAGGGGTTTGGTATATTTACACGAGGAATTTCATATTCGTATCATACATAGAGATATAAAGTCTAATAACATCCTCTTGGATGATGATCTTCAGCCTAAAATTGCTGACTTTGGGTTAGCAAGACTCTTACCTGATGACAGGTCTCATTTTAGCACGAAATTTGCAGGAACATTAGGATACGCGGCTCCAGAGTATGCAATAAATGGCCAATTATCTGAGAAGGTTGATATCTACAGCTATGGTATTGTAGTCCTAGAAATTATCAGTGGTCGAAAAAGTGAAGAATTGAATGTGAATGGCGTAGATGAAGGTGAATTCCTCGTTAAAAAGGCGTGGAAACTATATGAAAGAGGCATGCATCTAGAGTTGGTGGACAATACTTTAGACCCTAATGAGTATGATGAAGAAGAAGTCAAGAAAATCATAGAGATCGGTTTGCTTTGCACTCAAGCGTTAGCCGCAGTAAGACCGACAATGTCCGAAGTTGTTGTCTTGCTCCAAAACAAGGGCTTATTTAAAAACATGAGGCCAACTATGCCTTTCCTGGTTGAAACTAAATAA 1887 0.4134 MLQHSHLLTLFTFIFWSSGALNGVLSDPQTHILTIGCTPFTQFVVSDLSVFVDNLNATFRDVREQVRDQNKHFVTVQESGGGSPVSTLFQCRNYLSIADCLACFDVAAVLVRSCPAGAPGGHVVYDGCFLRYDASPFFDRATDTFNAALCGNKTTEEATAFTSAVQKLLMNLQKETPTIPGFVAATKTQVPNNGPTIYAFVQCTETISQIGCLNCLSVGYRNMQTCLPTSDGRAFDQGCFMRYSTTSFFPDNYQIIHVTPIMVDKQDSSKKGPIIGGVVGGVLLLVLVALALFVWTKPPKSPKRVLAGGNITGVSELKGAINYSYMDLKFATKNFSVENKLGEGGFGAVYKGTLKNGKIVAVKKLTLRQSNKVEEEFEREVKLISNVHHRNLVRLLGYCSKGNERILVYEYMKNTSLDKFLFGKMKDPLNWKQRYDIILGTARGLVYLHEEFHIRIIHRDIKSNNILLDDDLQPKIADFGLARLLPDDRSHFSTKFAGTLGYAAPEYAINGQLSEKVDIYSYGIVVLEIISGRKSEELNVNGVDEGEFLVKKAWKLYERGMHLELVDNTLDPNEYDEEEVKKIIEIGLLCTQALAAVRPTMSEVVVLLQNKGLFKNMRPTMPFLVETK 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0715 628 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Lele27g0715 628 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Lele27g0715 628 Gene3D Transferase(Phosphotransferase) domain 1 412 617 - -
Lele27g0715 628 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 622 - -
Lele27g0715 628 Gene3D Phosphorylase Kinase; domain 1 312 411 - -
Lele27g0715 628 ProSiteProfiles Protein kinase domain profile. 335 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0715 628 FunFam Cysteine-rich receptor-like protein kinase 2 412 616 - -
Lele27g0715 628 SUPERFAMILY Protein kinase-like (PK-like) 319 608 IPR011009 -
Lele27g0715 628 SMART serkin_6 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0715 628 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Lele27g0715 628 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Lele27g0715 628 Pfam Protein kinase domain 336 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0715 628 Pfam Salt stress response/antifungal 46 133 IPR002902 -
Lele27g0715 628 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Lele27g0715 628 Gene3D - 142 248 IPR038408 -
Lele27g0715 628 Gene3D - 36 137 IPR038408 -
Lele27g0715 628 CDD STKc_IRAK 341 610 - -
Lele27g0715 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Lele27g0715 628 FunFam Cysteine-rich receptor-like protein kinase 2 303 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0715 Lele-ChrLele27 15161026 15165234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0715 6 626 Receptor kinase-like Gene Family AT1G70520 35.647 2.62e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele27g0715 Pkinase 2.4e-50 CL0016