Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0713 ATGGGTGGCGCGTGCCTGCTGTTACATCATACCCCAAGGAACGGTCATTATTTACATGGTGAGTGGGCAAGTTGGAGGAGAAAATGGGGGAATGCATTGGTTTCAAGACCATTCGAAATGGAAGCAAAAGTGAAGCTTGCCATGATGCTTTCAACATCAGGGTCGGTCCACCAGGGACATGAAGTGGAGAAGAAGTGTTTGAATTCGGAGCTGTGGCATGCATGTGCTGGACCCCTGGTATCCCTACCAACTGCGGGTACTCGTGTTGTTTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCGGCCACAACTAATAGGGAAGTTGATGGGCACATACCTAATTATCCAAGCTTGCTACCCCAGTTGATTTGCCAACTTCATAATGTCACAATGCACGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACTCTGCAGCCACTGACTCCGCAAGGGCAAAAGGAAACTTTTCTTCCTATGGAATTGGGAATAACAGGTAAGCGGCCCTCAAATTATTTTTGCAAGATATTAACAGCAAGTGACACTAGCACACATGGAGGCTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTCTTCCCTTCTCTGGATTACTCACAGCAACCACCAGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGTCACGTTTTTCGGGGACAGCCAAAACGTCACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTTCCAAGAGACTTGTGACTGGAGATTCTGTGCTGTTTATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGCCGAGCCAATCGACCACAAACTTTGATTCCTTCATCAGTTCTATCAAATGATAGTATGCACATTGGATTGCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACTGTCTTCTATAATCCAAGGGCTTGTCCATCTGAGTTCGTTATTCCTCTTTCAAAATATATCAAAGCTGTGTACCATACATGTGTTTCGGTTGGTTTGCGTTTCAGAATGCTATTTGAGACTGATGAGTCAAGTGTTCGCAGATACATGGGTACAATAACTGGTATAAGCGATCTGGATCCTGTTCGCTGGCCAAACTCTCACTGGCGATCAGTAAAGGTTGGTTGGGATGAATCAACAGCAGGAGAGACACAGCCAAGAGTTTCATTGTGGGAGGTTGAGCCTTTGACAACATTCCCAATGTATCCATTGCTATTTCCCCTCAGCTTTAAACGTCCATGCTATCCCAGCCCCTCATCTGTGAATGGTGGCAGAGATGATGCAACTAATGGGCTAATGTGGCGTAGTGGGGGAGCTGGAGAACATAATTTCAACTCTTTAAACTTTCAAAGTGGTGGTGTGTTGCCGTGGATGCAGCAGAGGTTGGATCCAGCTTTGTCAGGAAATAATTATAATCAGCAGAACCAAGCATTGTTAGCAGCCGGTTTGCAGAACCCGGGGAACGGAGATCTACTGAGGCAACAAATGCTGCATTTTCAGCAGTCTTTTCCTTTTCTTCAACAATCTGGAAACCATAATCCTTCTTTGCAACTTCAGCAGAAGCAAGCAATTCAGCAATCCGTCTCATCCAATATTATGCAACCACAAGCGCATGTATTGACAGAGAACCTGTCACAGAACCTTCTTCAGAAACCACTTAACATTAACAATCAGGAAGACCAAGCACACCAGCAGAATAATACTTGTCATGATTCACTCTTGATTCAAAATGATCAGTTCCATCAGAGGCAACACTCTAATGTGCCTTCACCATCATTTACAAAACCGGATTTCTTAGATTCAAGCACGAAGTTCTCTTCATCAGTTTCCCCCATACAAAACGTACTTGGTTCACTGTGTCTTGAAGGGAGCGGTATTGATATTTTAAATCTGTCCAGGCCTGGTAAGTCCATGGTGACTGAACAGATGCCCCAACAATCATGGACATCGAAGTATCCACCTGTGCAGGTCAGTGCCTTTGGCAATTTGATGTCACAAGCACAGTATAGTGGAAAAGATTCTGCATCGGCACCTCCACATTGTACTTCAGATGACCAAAATCCTACTCTCTTTTGTAATATCGATTCATCTGGCCTTGTGCTCCCAACTACTGTCCCCGGTTACACACCTTCATCGGTTGATACTGATACTTCAACTATGCAAATAGGGAATTCTGGATTTCAGGGTCATCCATATGCTTGCATGCAGGATTCATCAGAATTATTGCAAAGTTCTGGGCAGGTTGACTCACAAAATCAAACCCAGACATTTGTCAAGGTTTACAAATCTGGGTCAGTTGGGCGCTCACTCAACATTTCCCGGTTCAGCAGCTATCATGAACTGAGAGAGGAGTTGGTTCAGATGTTTGGAATCGAGGGGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGACATGCTTCTCCTTGGCGACGATCCGTGGGAATCATTCGTCAATAATGTTTGGTACATCAAAATACTTTCACCTGAAGATATCCAGAAAATGGGAGACCAAGTGGCAGGACTGGAATCTTTAGGTCCTTAA 2592 0.4464 MGGACLLLHHTPRNGHYLHGEWASWRRKWGNALVSRPFEMEAKVKLAMMLSTSGSVHQGHEVEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLLPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQGQKETFLPMELGITGKRPSNYFCKILTASDTSTHGGFSVPRRAAEKVFPSLDYSQQPPAQELIARDLHDVEWKFRHVFRGQPKRHLLTTGWSVFVSSKRLVTGDSVLFIWNEKNQLLLGIRRANRPQTLIPSSVLSNDSMHIGLLAAAAHAAATNSCFTVFYNPRACPSEFVIPLSKYIKAVYHTCVSVGLRFRMLFETDESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGETQPRVSLWEVEPLTTFPMYPLLFPLSFKRPCYPSPSSVNGGRDDATNGLMWRSGGAGEHNFNSLNFQSGGVLPWMQQRLDPALSGNNYNQQNQALLAAGLQNPGNGDLLRQQMLHFQQSFPFLQQSGNHNPSLQLQQKQAIQQSVSSNIMQPQAHVLTENLSQNLLQKPLNINNQEDQAHQQNNTCHDSLLIQNDQFHQRQHSNVPSPSFTKPDFLDSSTKFSSSVSPIQNVLGSLCLEGSGIDILNLSRPGKSMVTEQMPQQSWTSKYPPVQVSAFGNLMSQAQYSGKDSASAPPHCTSDDQNPTLFCNIDSSGLVLPTTVPGYTPSSVDTDTSTMQIGNSGFQGHPYACMQDSSELLQSSGQVDSQNQTQTFVKVYKSGSVGRSLNISRFSSYHELREELVQMFGIEGEDPLRSGWQLVFVDRENDMLLLGDDPWESFVNNVWYIKILSPEDIQKMGDQVAGLESLGP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0713 863 CDD B3_DNA 173 274 IPR003340 GO:0003677
Lele27g0713 863 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 63 852 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele27g0713 863 FunFam Auxin response factor 172 276 - -
Lele27g0713 863 SMART B3_2 174 276 IPR003340 GO:0003677
Lele27g0713 863 FunFam Auxin response factor 338 410 - -
Lele27g0713 863 Gene3D - 338 410 - -
Lele27g0713 863 ProSiteProfiles PB1 domain profile. 765 847 IPR000270 GO:0005515
Lele27g0713 863 Pfam B3 DNA binding domain 174 275 IPR003340 GO:0003677
Lele27g0713 863 FunFam Auxin response factor 760 852 - -
Lele27g0713 863 Pfam Auxin response factor 300 383 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele27g0713 863 Gene3D - 172 275 IPR015300 -
Lele27g0713 863 Gene3D - 760 852 - -
Lele27g0713 863 ProSiteProfiles B3 DNA-binding domain profile. 174 276 IPR003340 GO:0003677
Lele27g0713 863 SUPERFAMILY CAD & PB1 domains 756 837 - -
Lele27g0713 863 SUPERFAMILY DNA-binding pseudobarrel domain 158 303 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0713 Lele-ChrLele27 15120689 15129569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0713 144 863 B3 DNA Binding Superfamily AT5G37020 63.699 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele27g0713 B3 8e-20 CL0405