Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0690 ATGGCTGCGACTTCGCTTTTTTTTGGGTTCTTTCAATTTCGTGGAAGGGAGAAATTTGATAGCTTTGAATTTAAAGGGATGCTTGCCGCTGCTTCTTTTACTTCCAAACGCATTCGAGCTTCGGAGTTTTTTCAACGTGATGGTAGTAGACCCGGGATGGTATCACGCAGTGCCACTGCTATAAGTTATTTTGAAAATTCTTCCTTTGTTGATTTGAGCAGGAACTATGGGATTAGCAATCGAGTTCGCTCGATTGTTAGCCTTTATGGCATCAGCACGTTCCCTAGTCGTAGTAGGATTAGTAGAGAGTGCTTTAATGTCAATCCGACTGCTCCCAGAAGATCTACGAGTTTACTTCTTAGTATAAAGGGGTTTCTCTCTGATTCATCACCTTCTAATTCCTATTCTTCACTATATGGCCAAGTAACCAGACCTGGCTTTTCACAACCTGGTTCAACGGTAGACGGACGAGCATTATTCTCAACTTCAGCTAAAACTGATGATGGAACGTCCTCAAAGAAGATCGAGACCCAGAACCAAAAAACTACTACCACAATTGCTAAAACTTTTTCAGGGGAACAAGTTGCTGACATTAAAATTCTGCGTACACTTGCGAGTTACTTGTGGATGAAGGATAATCTTGAATTCCGATTCCGGGTTATTGCTTCTTTGGGTTTTCTTATTGGTGCTAAGGTGCTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTTGATTGGTTGACGACTGCTAACGGCAATGCTGGTGATCTTGCTTCTTTTGCGGCTGCAAATTCAACTCTGTTAGCTCTTTTCGCAACTCCAGCATCTGTGTTAATCGGATATGGAATTGCTCGTTCAGGAGCTTCTGCTTTCAATGAACTGCGTACTGCTGTATTCTCTAAGGTGGCATTGCGAACAATTCGATTAGTATCTAGAAAGGTGTTCTTACATTTGCATGAGCTTGACCTACGTTATCATCTAAGTCGAGAAACTGGAGCATTAAATAGAATAATTGATCGTGGTAGTCGTGCAATAAATTTTATACTCTCATCTATGGTGTTCAACGTAGTGCCCACTATATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATTCATCACATCCTTATCAGTTGCTGCTTATGTTATTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGGTCATGAATAAAGCTGATAATGATGCGAGTACCAGGGCAGTCGATTCACTCATCAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGGTGAAAAATATGATGAATACCTAAAGAGGTACGAAGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTTGGTCAAAATGTGATATTTAGTACTGCACTTTCTACGGCAATGGTGTTGTCTTCTCATGGGATTATGAGTGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAACGGGCTCCTCTTCCAACTGTCTCTTCCGCTCAATTTCCTTGGCAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAGGCAATGTTTCAGTTACTCGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCGCTGGAATTGAACGGAGGGAGCATAGAGTTTGAAAATGTGCACTTCAGTTACCTTGCAGAGAGAAAAATACTTGATGGAATATCTCTGGTCGTGCCAGCCGGAAAAAGTGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAATCAACTATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTCATTCTGGAAGTATAAAAATCGATGGTCAAAATATCCAGGATGTAACCCTTGATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCACAACATCCATTATGGTCGACTTTCAGCCACTAAAGAGGAAGTCTATAAAGCTGCTCAACAAGCAGCAATTCATGACACTATCATGAATTTTCCTGGAAAGTATTCAACAGTTGTGGGAGAGCGAGGACTCAAGTTGAGTGGTGGTGAGAAGCAACGTGTTGCCTTGGCTCGTGCGTTTTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACGAGTGCACTTGACAGCACAACAGAAGCAGAGATATTAAATGCTTTGAAATCTTTAGCAAATAATCGCACTTCCATATTCATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAATGGAAAGGTGGTTGAACAAGGACCACATGAACTGCTCTTATCTAGGGCAGGAAGATATGCACAACTTTGGGCCCAGCAAAATAACACGGTTGATGCCGCAGCGATGAAAGCCGCCCCATAA 2415 0.4128 MAATSLFFGFFQFRGREKFDSFEFKGMLAAASFTSKRIRASEFFQRDGSRPGMVSRSATAISYFENSSFVDLSRNYGISNRVRSIVSLYGISTFPSRSRISRECFNVNPTAPRRSTSLLLSIKGFLSDSSPSNSYSSLYGQVTRPGFSQPGSTVDGRALFSTSAKTDDGTSSKKIETQNQKTTTTIAKTFSGEQVADIKILRTLASYLWMKDNLEFRFRVIASLGFLIGAKVLNVQVPFLFKLAVDWLTTANGNAGDLASFAAANSTLLALFATPASVLIGYGIARSGASAFNELRTAVFSKVALRTIRLVSRKVFLHLHELDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYKFGAPFAFITSLSVAAYVIFTLTVTQWRTKFRKVMNKADNDASTRAVDSLINYETVKYFNNEDYEGEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKAMFQLLEERADVRDKDNAKPLELNGGSIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDGQNIQDVTLDSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYKAAQQAAIHDTIMNFPGKYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSRAGRYAQLWAQQNNTVDAAAMKAAP 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0690 804 Gene3D ABC transporter type 1, transmembrane domain 207 546 IPR036640 GO:0005524|GO:0016020
Lele27g0690 804 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 188 787 IPR039421 -
Lele27g0690 804 CDD ABC_6TM_ATM1_ABCB7 223 530 - -
Lele27g0690 804 Pfam ABC transporter 572 721 IPR003439 GO:0005524
Lele27g0690 804 Gene3D - 547 802 IPR027417 -
Lele27g0690 804 FunFam ABC transporter B family member 25 548 802 - -
Lele27g0690 804 SUPERFAMILY ABC transporter transmembrane region 215 535 IPR036640 GO:0005524|GO:0016020
Lele27g0690 804 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 556 790 IPR003439 GO:0005524
Lele27g0690 804 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 221 522 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele27g0690 804 Pfam ABC transporter transmembrane region 221 509 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele27g0690 804 FunFam ATP-binding cassette sub-family B member 7 192 544 - -
Lele27g0690 804 SMART AAA_5 581 767 IPR003593 -
Lele27g0690 804 ProSitePatterns ABC transporters family signature. 693 707 IPR017871 GO:0005524|GO:0016887
Lele27g0690 804 CDD ABCC_ATM1_transporter 556 791 - -
Lele27g0690 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 545 791 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0690 Lele-ChrLele27 14910416 14922946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0690 392 802 Calmodulin-binding Proteins AT2G36910 35.308 1.05e-62 228