Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0684 ATGGGGAAGCAACCGGTTAGGATGAAGGCCGTGGTCTATGCTCTTTCACCTTTCCAGCAGAAGGTTATGACTGGTCTCTGGAAAGATTTGCCTTCCAAGATTCACCACAAGATCTCTGAAAATTGGATCAGTGCCACACTCTTGCTCGGTCCTCTTGTCGGTACCTACACGTATGTTCAAAACTACCAGGAAAAGGAGAAGCTGGCTCACAGGTTCTGA 219 0.4795 MGKQPVRMKAVVYALSPFQQKVMTGLWKDLPSKIHHKISENWISATLLLGPLVGTYTYVQNYQEKEKLAHRF 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0684 72 Gene3D - 2 71 IPR036642 GO:0005750|GO:0006122
Lele27g0684 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Lele27g0684 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Lele27g0684 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 10 65 IPR036642 GO:0005750|GO:0006122
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0684 Lele-ChrLele27 14829527 14831048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0684 1 72 Chloroplast and Mitochondria Gene Families AT3G10860 79.167 7.89e-41 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1406 25 10091623 10103847 Lele27g0684 27 14829527 14831048 hybridization
Lele26g1428 26 10036702 10038780 Lele27g0684 27 14829527 14831048 hybridization