Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0678 ATGCTATTGAGGAAAATGTGGGAATCGGTATCGAACCGTTCGAATTCTGCTTCAAATTCCAACTCGCTGGAACGCTTTCGTTGCGTTGATTCGCCTCTAGGAGTGTTTGAGCAAATTCCTTCCGATATATTGATTCAAATCTTCAGGCTTCTGGATCCCAAAAAAGCTGCGCAATTGACCCTTGTGTGCAAAGCATGGAGATCGCTGGCCTCCGATAGCCGGCTGTGGATTTATTTCCTTCAGAATTACCAATTGGAGCCATGGGAGACCATTTTTTTCGCCGAGACCAATTTGAGGTCCGGTCATCCTCTTCCAACCTTAGTCGGTCAGATGCCTCAGTTATCTTTCAAGCGTATATATGGCCTACGAGAACAAGTTCCTGCTGCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAATATGACCGCCCATCAGGGCGATCGGCTACCTTTTTGGAATTCGGTAACCTTGAGACTCCAATGTTCACTAGACTTAGACATTTTTTTGCAACTATTTATAGCAGGATGCAGGTTAAACCAAGTACTCAGCCAGTCATTGTTTCCATTCCAATATGCCATTATGACGATACTGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGTGCTTCCCTCTTTGACATGAATGTTCCTGCTATTTGTGCCGTCAACCAGGCCACTTTGGCTCTGTATGCTGCAAAACAAGCTTCTGGAATAGCCGTTAATGTTGGTTTTCAGGTCACATCTATAGTTCCAATTCTGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGGACTGGGAGCAATCAAACTCACAGGATTCCTTAGGGAGCTGATGCAACAGAACAACATGAATTTTGAATCTTTGTACACTGTTCGCACACTAAAAGAGAAGCTATGCTATGTTGCTATTGATTATGAAGCTGAACTATCAAAAGATACACAAGCATCATTTGAAGCAGCAGGAGAAGGACGGTTTACGCTTTCAAAAGAGCGGTTTCAAACAGGAGAGATCTTGTTCCAGCCTCGTCTTGCTGGATTGCAAGCAATGGGTTTGCACCAGGCTGTAGCCCTTTGTATGGACCATTGCCATTCTGCAGAATTAGCAGGTGACCCTGATTGGTTTAAGACTGTGGTTTTATCTGGGGGAACTGCATGTTTACCTGGTCTGGCAGAAAGGTTAGATAAGGAACTTCGTGACTTGTTACCTCCCCAGTTGTCCAGTGAAATCAATGTCATGCCTCCTCCATATGGTGCTGATACTGCATGGTTTGGAGCAAGGACTATTGGCAATTTGAGTACCTTTCCTGGTCCGTGGTGTATAAAGAAGAAGCACTTCCACAAGTCTCGACTCAATCTCATATGGTGA 1401 0.4475 MLLRKMWESVSNRSNSASNSNSLERFRCVDSPLGVFEQIPSDILIQIFRLLDPKKAAQLTLVCKAWRSLASDSRLWIYFLQNYQLEPWETIFFAETNLRSGHPLPTLVGQMPQLSFKRIYGLREQVPAAVIIDGGSGYCKFGWSKYDRPSGRSATFLEFGNLETPMFTRLRHFFATIYSRMQVKPSTQPVIVSIPICHYDDTESAKASRRQLKEAICASLFDMNVPAICAVNQATLALYAAKQASGIAVNVGFQVTSIVPILNGKVMRKVGVEVVGLGAIKLTGFLRELMQQNNMNFESLYTVRTLKEKLCYVAIDYEAELSKDTQASFEAAGEGRFTLSKERFQTGEILFQPRLAGLQAMGLHQAVALCMDHCHSAELAGDPDWFKTVVLSGGTACLPGLAERLDKELRDLLPPQLSSEINVMPPPYGADTAWFGARTIGNLSTFPGPWCIKKKHFHKSRLNLIW 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0678 466 Gene3D Actin; Chain A, domain 4 277 360 - -
Lele27g0678 466 Pfam Actin 176 454 IPR004000 -
Lele27g0678 466 SUPERFAMILY F-box domain 32 92 IPR036047 GO:0005515
Lele27g0678 466 Gene3D - 30 102 - -
Lele27g0678 466 Pfam F-box-like 37 76 IPR001810 GO:0005515
Lele27g0678 466 ProSiteProfiles F-box domain profile. 33 79 IPR001810 GO:0005515
Lele27g0678 466 PANTHER ACTIN 171 458 IPR004000 -
Lele27g0678 466 Gene3D - 234 432 - -
Lele27g0678 466 CDD NBD_sugar-kinase_HSP70_actin 130 274 - -
Lele27g0678 466 SUPERFAMILY Actin-like ATPase domain 244 455 IPR043129 -
Lele27g0678 466 SUPERFAMILY Actin-like ATPase domain 129 249 IPR043129 -
Lele27g0678 466 SMART fbox_2 39 79 IPR001810 GO:0005515
Lele27g0678 466 SMART actin_3 127 457 IPR004000 -
Lele27g0678 466 Gene3D - 173 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0678 Lele-ChrLele27 14766589 14772661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0678 176 456 Cytoskeleton Gene Families AT3G12110 30.690 1.34e-38 142