Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0664 ATGTCCCAAACCCTCAACCTCCCCATCCCCGCCGGGCGGCCACTCAATTCTTCCTCATCCTCCGCCTCATCCCTCAGATTTCTCCGGCGTCTACCTGTTAAGTCCTCAAAGAAGTGTAGAGCTTCGATCGGCGCTGTCGCGACGGAGGCTGATCCAGCAGTGATGAATTCTTGGCGGCCATTGAGTCTCTATGAGATGCTCCGAGTGAACCAGAATGCTTCTCCGAAGGAAATCAAGTCGGCGTATAGGAGCTTGGCCAAGCTGTACCATCCTGATTCGGCCGTGCGCCAATCGGAATTGGACGAAAGGGACTTCATCGCGATCCACAACGCCTATGAGACGCTATCCGATCCGTCGGCTAGAGCACAGTATGATCTTTCGTTGACGGCTGCTCGCCGGAGGAGGCGTCCGTATCTGTCGTCGATGCAAGATCACTCTTCGGGATTCTATACGACCCGAAATTGGGAGACGGATCAATGCTGGTAG 486 0.5494 MSQTLNLPIPAGRPLNSSSSSASSLRFLRRLPVKSSKKCRASIGAVATEADPAVMNSWRPLSLYEMLRVNQNASPKEIKSAYRSLAKLYHPDSAVRQSELDERDFIAIHNAYETLSDPSARAQYDLSLTAARRRRRPYLSSMQDHSSGFYTTRNWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0664 161 CDD DnaJ 64 117 IPR001623 -
Lele27g0664 161 SUPERFAMILY Chaperone J-domain 56 133 IPR036869 -
Lele27g0664 161 Gene3D DnaJ domain 56 148 IPR036869 -
Lele27g0664 161 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Lele27g0664 161 SMART dnaj_3 61 120 IPR001623 -
Lele27g0664 161 ProSiteProfiles dnaJ domain profile. 62 128 IPR001623 -
Lele27g0664 161 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lele27g0664 161 PRINTS DnaJ domain signature 64 82 IPR001623 -
Lele27g0664 161 PRINTS DnaJ domain signature 82 97 IPR001623 -
Lele27g0664 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Lele27g0664 161 MobiDBLite consensus disorder prediction 1 20 - -
Lele27g0664 161 Pfam DnaJ domain 63 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0664 Lele-ChrLele27 14577411 14577896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0664 64 125 C2H2 Transcription Factor Family AT1G74250 43.939 2.21e-09 53.5