Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0650 ATGTGGTCGCTCACAATCAGCATTCCCTACTTCATATTGGCATTCCATCATCAAATCATTTCTGGTGTAGAGCAAGTTGAGTTACAGGATCATAGTAGCCAAGAAAAGAACATCTCCTCCTTTGATGGAGAACTTGGTGTTTTTGTGAAGTTACAGGTTATTGAGAAAGATATCAACTGCAGGTCTTTGCCAATGGCTAGTAAATCTGTTGTAGACTTAATACAGTCATCCTCCGGGGTTCATTTCTCTGGATTTCACATGGATGCTTTAGAGAAAATAAATGCTGGAACAGAGCCTCCAACAACTTGTGTAGCTGACCACATGTGTAATCAACCTTTTGTCATAGGTGTTGCTGGTGGAGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCACAATTTGACGGAGGAGGAGCTTACTAGAGTACAGGATTACAACTTTGATCATCCTGATGCTTTTGATAATGAGCAATTGCTTGGAGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCAAATCCAGCTAGACGGGTAAACCCTTCTGATGTGATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAAATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAGGCGTGATACGGTTCAAAAGGGTCGAGATATTGGTGCTGTGCTTGATCAGTATTCAAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCAGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCTAACCTTTATGTTATTCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAATAAAAACGCATGATTTCGTATTTTATTCTGACCGTTTGATCCGTCTGGTTGTTGAGCATGGCCTGGGACATCTACCATTTACAGAAAAACAAGTAATCACTCCGACTGGGTCTGTGTACACTGGAGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCTGTTGTCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGGATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGGGAAGGGGATAATAGCCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCGGTAAGATCCTGCTATGCACCCCAAGGCGTGCATGTGGTCTGCAAAGCCTTTCCCAGAATAAAAATAGTGACATCTGAGATCGAGTTGGGCCTTAATAAAGACTTCCGGGTCGTACCGGGCATGGGTGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAGCAGGTGGTGGTCCCTTCAGATTAG 1650 0.4079 MWSLTISIPYFILAFHHQIISGVEQVELQDHSSQEKNISSFDGELGVFVKLQVIEKDINCRSLPMASKSVVDLIQSSSGVHFSGFHMDALEKINAGTEPPTTCVADHMCNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVQDYNFDHPDAFDNEQLLGVMDKLKHGQAVDIPNYDFKSYKRDANPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTVQKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVVRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISVRSCYAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0650 549 CDD PRTases_typeI 389 490 IPR000836 -
Lele27g0650 549 CDD UMPK 125 312 IPR000764 -
Lele27g0650 549 FunFam Uridine kinase 316 538 - -
Lele27g0650 549 Gene3D - 109 315 IPR027417 -
Lele27g0650 549 PANTHER URIDINE KINASE 104 443 - -
Lele27g0650 549 FunFam Uridine kinase 109 315 - -
Lele27g0650 549 SUPERFAMILY PRTase-like 315 539 IPR029057 -
Lele27g0650 549 PRINTS Uridine kinase signature 142 153 - -
Lele27g0650 549 PRINTS Uridine kinase signature 187 202 - -
Lele27g0650 549 PRINTS Uridine kinase signature 112 129 - -
Lele27g0650 549 PRINTS Uridine kinase signature 258 269 - -
Lele27g0650 549 PRINTS Uridine kinase signature 280 293 - -
Lele27g0650 549 PRINTS Uridine kinase signature 244 254 - -
Lele27g0650 549 Pfam Phosphoribulokinase / Uridine kinase family 114 300 IPR006083 GO:0005524|GO:0016301
Lele27g0650 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 305 IPR027417 -
Lele27g0650 549 TIGRFAM udk: uridine kinase 112 312 IPR000764 -
Lele27g0650 549 Pfam Uracil phosphoribosyltransferase 330 538 - -
Lele27g0650 549 Gene3D - 316 538 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0650 Lele-ChrLele27 14436877 14445064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0650 65 541 PRT Gene Family AT4G26510 80.753 0.0 786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0650 27 14436877 14445064 Lele01g1275 01 7758477 7761096 CCT
Lele27g0650 27 14436877 14445064 Lele02g1544 02 19487811 19489898 CCT
Lele27g0650 27 14436877 14445064 Lele03g1288 03 7732177 7734688 CCT
Lele27g0650 27 14436877 14445064 Lele04g1532 04 20337990 20339898 CCT
Lele25g1432 25 10530172 10538425 Lele27g0650 27 14436877 14445064 hybridization
Lele26g1461 26 10370562 10379590 Lele27g0650 27 14436877 14445064 hybridization