Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0631 ATGAATTTAGGGTCCTTGATTTCCTTTGCATCTTCAAACTCTGCATCATCAAGAGAAGATCATAGAGCGGCTAGTTCCAGAACCAGACCTTCTCATAATTCAAGGCCATCGTTTTTGATTCGGATGGCCATGAGAATATCAAGAGCAAGATGGTTCACTTTCTTAAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCTGATCTTGGCTCCAATCCTTTCAATTCAAGCACTTGGATGACATTAGAGTTGATTGCTCTGATGGTTCAGATAAGCCTTACAACCTTGGTTTTGGCTATTTCTAAGAAGGAGAGGCCTGTTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGCTGTCTGCTCAATCTGCTGCTGCTTTATGGCCGCTATCGTCAGCTTTATCTGTCTCACGGAGATGCTCTTAGCCTCTCTTATATGGAACAACAGAGAGGCAATGAAGAAACCAGGTGTTCACATTTGATGAACAGATGCCGGACTTCGCTGGAGCTTTTCTTCGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCATTCCAAAGAGCTCCAAAACTGCACGTGCTCTGGATCTCGTTGCTTGCTTGGAATGCCATAACCTACTCTTTCCCTTTCCTTCTCTTCCTCCTGCTCTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTCGGTTACAACATGAACATGGCCTCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTTCCAAGTTGGAGATACAAGCTAGCTCATAACAAGTTGGACAACAACGGCCATGATTCTGCAGCCAGTGAAGGGCTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 1005 0.4318 MNLGSLISFASSNSASSREDHRAASSRTRPSHNSRPSFLIRMAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELIALMVQISLTTLVLAISKKERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSYMEQQRGNEETRCSHLMNRCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLWISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKLAHNKLDNNGHDSAASEGLINEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLRIISCCPLCKQGLQR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0631 334 ProSiteProfiles Zinc finger RING-type profile. 288 329 IPR001841 -
Lele27g0631 334 SMART ring_2 288 328 IPR001841 -
Lele27g0631 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 333 IPR013083 -
Lele27g0631 334 CDD RING-H2_RNF111_like 286 329 - -
Lele27g0631 334 SUPERFAMILY RING/U-box 278 332 - -
Lele27g0631 334 Pfam Ring finger domain 287 329 IPR001841 -
Lele27g0631 334 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0631 Lele-ChrLele27 14289005 14292130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0631 25 332 C3H Transcription Factor Family AT4G26580 71.290 1.49e-152 430