Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0608 ATGGCGGACTCGGATAACGATTCCGGAGGTGCTCCGAACGCGGGAAACAATACGAACAGCAGCGAACACTCGCTGCGAGAGCAAGACCGGTTTCTTCCTATCGCGAATGTGAGCAGGATCATGAAGAAGGCTCTTCCAGCTAATGCGAAGATCTCGAAGGACGCTAAGGAGACAGTGCAAGAGTGCGTATCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCCGATAAGTGCCAGAGAGAGAAGAGGAAGACCATCAATGGCGACGATTTGCTATGGGCTATGACGACGTTGGGATTTGAAGACTACGTGGAGCCGCTCAAGATATACCTCCAGAGATTCAGGGAAATGGAAGGCGAGAAGAGCGTGGTGGCGCGTGACAAAGACGGTGGTGTTATAGGAGGGAACGCTGCGAATAGTGGCTACGACGGCGGAGGAGGAGTTGGTGGTGGTGGGGGAGTGTATGGCGGAGTAGGGATGATGATGCATCAGGGACACTTGTACGGGTCTGGAGGGTTTCATCCAATGGCTGTGAGCGGAGGAAGTGGTGGTCCTGTGATGGGAAAGAGTGGGGCCAGTTATCCGAGTGCCGGATCTAATGCAGAAGACACTATTGATTTTATTTGA 627 0.5343 MADSDNDSGGAPNAGNNTNSSEHSLREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQRFREMEGEKSVVARDKDGGVIGGNAANSGYDGGGGVGGGGGVYGGVGMMMHQGHLYGSGGFHPMAVSGGSGGPVMGKSGASYPSAGSNAEDTIDFI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0608 208 Gene3D Histone, subunit A 18 133 IPR009072 GO:0046982
Lele27g0608 208 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele27g0608 208 FunFam Nuclear transcription factor Y subunit B-3 20 141 - -
Lele27g0608 208 MobiDBLite consensus disorder prediction 1 28 - -
Lele27g0608 208 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele27g0608 208 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Lele27g0608 208 SUPERFAMILY Histone-fold 28 129 IPR009072 GO:0046982
Lele27g0608 208 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Lele27g0608 208 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Lele27g0608 208 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0608 Lele-ChrLele27 14064182 14064922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0608 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.800 2.22e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele27g0608 CBFD_NFYB_HMF 2e-27 CL0012