Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0596 ATGGTGATGGTGATGGTGATGATGAAGCTGAAGATGATGATGGGATTGTCATCAAAATACAGAGTCCTAGCTTTGTTTGCTTTGGTTATTATTATTTCCATGGTGGGTTTATCAGCTGCAGAAAGTGGTGAAAATGGTGGTTCTGTGAGAAATTTCATTACCTGGGATGATATGACAGTGGATGAAAATAGCTTAGCTTCAAGATCTAAGAGTGAAAATGTTCAGGTGATTTTGGTTGACCAGAATGGAAATGGAGATTCATCTACAGTTCAAGGTGCTGTGGATATGGTTCCAGATCATAACACAGAGAGAGTGAAAATATACATTTCTCCAGGAACTTACAGAGAAAAGGTGTTTCTACCAAGGAACAAGCCATATGTATCATTTATAGGGAAAAGAAATCAAACACACGGTGTTGTGATTACTTGGAACAGCAAGTCATCTGACATAGGCTCAAATGGTCAAGAATTGGGGACTTATGGTTCTGCAACTGTAGCAGTAGAATCTGATTACTTCTGTGCAAATAGGATCACTTTTGAGAACTCTGTAGTTGCAGAAGCTGGTGGACAAGGAATGCAAGGAGTAGCATTGAGGATAGACAGTGACAGATCCATATTTTATCAAGTTAGATTCTTGGGAACACAAGACACACTTTTGGATAACACTGGAACTCATTACTTCTTCAAATGTTTCATCCAAGGCAAAATTGATTTCATCTGTGGCAGTGCAAGATCACTTTATGAGGATTGTCGCTTGAGGTCGACGGCTGATAACTATGGAGCGATTGCAGCTCATCACAGGGATACACCCAATGAAGAAACAGGATTCTCTTTTGTAGGCTGTTCAATCCAAGGAACTGGTAAAGTCTACCTTGGGAGAGCATGGGGAGATTATTCAAGAATCATATATTCAAACTGTTATATGGCAGATCTTGTAATCCCACAAGGCTGGACTGAATGGGATCACCCTTCTCGAAAGAAGACTGCACTTTTTGGAGAGTTTCAGTGCCAAGGAAAAGGAGCAGATAGAAGAAGTAGAGTTCCATGGTCAAAATCTTTCACTTATGAGCAAGCAAGGCCTTTTCTTGACAGAAGCTTCATCAATGGAGACCAATGGCTTAGATTGTAG 1128 0.4034 MVMVMVMMKLKMMMGLSSKYRVLALFALVIIISMVGLSAAESGENGGSVRNFITWDDMTVDENSLASRSKSENVQVILVDQNGNGDSSTVQGAVDMVPDHNTERVKIYISPGTYREKVFLPRNKPYVSFIGKRNQTHGVVITWNSKSSDIGSNGQELGTYGSATVAVESDYFCANRITFENSVVAEAGGQGMQGVALRIDSDRSIFYQVRFLGTQDTLLDNTGTHYFFKCFIQGKIDFICGSARSLYEDCRLRSTADNYGAIAAHHRDTPNEETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSNCYMADLVIPQGWTEWDHPSRKKTALFGEFQCQGKGADRRSRVPWSKSFTYEQARPFLDRSFINGDQWLRL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0596 375 FunFam Pectinesterase 72 375 - -
Lele27g0596 375 Gene3D - 71 375 IPR012334 -
Lele27g0596 375 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 374 - -
Lele27g0596 375 SUPERFAMILY Pectin lyase-like 76 373 IPR011050 -
Lele27g0596 375 Pfam Pectinesterase 77 370 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0596 Lele-ChrLele27 13902230 13904316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0596 14 327 Carbohydrate Esterase AT5G55590 52.553 1.00e-130 376