Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0586 ATGGTGATGTGCTCGGGGACTAGGACTATGCAGATAGAAGCCATGAAGAAGCTAGACCGTCTCTCTAAACATGCCCCTGAGAGTTTAATAGTTCTCATCATACCCCATCTCATTGACAATCTCGATGACTACAATTCAATTCATTCAGGTTGTTCTCTTCAAAAGGCTTCTGCATATTGTTTAAAATGTATAGCTTGTAGAGGTGATGGTGGATTGGCAAAGGAAATAGTTGTTGCTAGTAATGGTGGCGTAGAAGTTATCATCAATTTGTTAAATTCTTGTACAGTTGATATTAGACTATACGTTTTGGAAATTTTGAGCACATTGGCATTGCTGAGGGATGTTAGGAGGGCACTCACTAGATTAGGAAGTCTTAAATTTCTTGTGGAGGCTGCTAGCTGTGGTAGCATGGTTTCTAGGGAAAGAGCTTGTCAAGCAATGGGGTTACTTGGTGTCCCAAGACGAGCCAGGCGTACACTAGTTGAACTAGGAGTGATTCCAGTACTTGTTGAGTGTCTTCGCGATGGAGATCACATCATGAAACTTGTGGCTGGTAATGCCCATGGTGTGATATCTGCTCATATTGATTATATTAGATTAGTTGCTCAATCTGGGGTTATCAGTCTTTATGCTGAGCTTCTTCAAGGACCTGACCCTTCTGGTAAGGAGATTGCTGAGGATGTATTTTGTATATTGGCTGTTGCTGAGGAGAATGCTGTTGAAATCACCAGACACTTGGTGAGAATTCTTAGAGAAGGCGACGATGAATCAAAGGCATCTGCTGCTGATGTGTTATGGGATCTGGCAAAGATAAAGCAGAATGTTTCTGGGGCTTGTGCTGATGAGGCAGATAGAATGGCACTTGCTGAAGCGGTGGCAATCCCAATTCTCATCGAAATGATGCTGCATGATGAGTTGGAGGAAGTAAGGGATAATGCAGCTGAGGCTCTTGTCAACTTTGCTGAAGATCCTTTGTACCATGATAGAGTATCTGATGCAATAAGTGTTCCATCATTTAGAGATATGCAGAACAGATTACTTCCCATTCGTGCTTCAAATGAGCATATGGCTAGATCGTTACGAAGGATGACTGATTGGCAGCTCACATGGAACCCTGATCTTATTTAA 1128 0.4238 MVMCSGTRTMQIEAMKKLDRLSKHAPESLIVLIIPHLIDNLDDYNSIHSGCSLQKASAYCLKCIACRGDGGLAKEIVVASNGGVEVIINLLNSCTVDIRLYVLEILSTLALLRDVRRALTRLGSLKFLVEAASCGSMVSRERACQAMGLLGVPRRARRTLVELGVIPVLVECLRDGDHIMKLVAGNAHGVISAHIDYIRLVAQSGVISLYAELLQGPDPSGKEIAEDVFCILAVAEENAVEITRHLVRILREGDDESKASAADVLWDLAKIKQNVSGACADEADRMALAEAVAIPILIEMMLHDELEEVRDNAAEALVNFAEDPLYHDRVSDAISVPSFRDMQNRLLPIRASNEHMARSLRRMTDWQLTWNPDLI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0586 375 Pfam HEAT repeat 294 322 IPR000357 GO:0005515
Lele27g0586 375 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 278 333 - -
Lele27g0586 375 SUPERFAMILY ARM repeat 10 326 IPR016024 -
Lele27g0586 375 Gene3D - 224 347 IPR011989 -
Lele27g0586 375 Coils Coil 303 323 - -
Lele27g0586 375 Gene3D - 2 223 IPR011989 -
Lele27g0586 375 SMART arm_5 281 322 IPR000225 GO:0005515
Lele27g0586 375 SMART arm_5 153 193 IPR000225 GO:0005515
Lele27g0586 375 SMART arm_5 227 270 IPR000225 GO:0005515
Lele27g0586 375 SMART arm_5 69 111 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0586 Lele-ChrLele27 13649589 13650914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0586 76 268 U-box Gene Family AT3G46510 25.373 2.24e-07 50.8