Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0566 ATGCATAATCAAGAAATTTGCAGTTCAATGAAGGAATCTCGTCTTGTTGCGAAGAAATTCTTGGCCAGGCCTCAACATGAAGGCGTTGGGGCTGTTATTAGAAGAAGCATAGGACGGTTTGAGCTCAAGTACTTTGATCCTTTTCTGTTGTTGGATGAATTCTCAGTTTCTGCTCCAGCTGGGTTCCCTGATCATCCACATAGAGGGTTTGAGACAGTCACATATATGTTACAGGGAGCTATAACACATGAGGATTTTGAAGGGCACAACGGAACGATTGAAGAAGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAGATGCCTGCAGCTCAGGGAATTCAAAAGGGTCTTCAGCTTTGGATCAATCTTGCTTCCAATCATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGGAGAGGAAAACGGCATTAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAACAAAGTCTCCAATCCAAACAAGGACTCCAACAATGTACTTAGATTTCTCTCTCAAACCTGGGGCCCACTTGCAGCAACCTATTTCAAAGTCATGGAATGCTTTTGTCTATGTTTTGGAAGGAGAAGGTGTGTTTGGCAACAAGAAATCTCAACCTGTCTCTTCACACCATATTCTTCTTCTTGGTTCTGGGGGAGATGGTCTTGAAGTATGGAACAAGTCTTGTAATAACAATAAGGTGCTTAGGTTTGTTCTTGTTGGAGGCCAACCATTGGGTGAACCTGTGGCTCAGTTTGGACCCTTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATCGATGACTTTGAGAATTGTGTCAATGGGTTTGAGAAAGCTAGGCATTGGAAATCTGAGGCTGCAATTAGTCTTGATTTTTAA 918 0.427 MHNQEICSSMKESRLVAKKFLARPQHEGVGAVIRRSIGRFELKYFDPFLLLDEFSVSAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHNGTIEEGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASNHKMIEPRYQEMLSKDIAEGEENGIKVRVIAGEALGTKSPIQTRTPTMYLDFSLKPGAHLQQPISKSWNAFVYVLEGEGVFGNKKSQPVSSHHILLLGSGGDGLEVWNKSCNNNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAISLDF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0566 305 PIRSF Pirin 12 296 IPR012093 -
Lele27g0566 305 SUPERFAMILY RmlC-like cupins 14 297 IPR011051 -
Lele27g0566 305 CDD cupin_pirin_N 31 128 - -
Lele27g0566 305 Pfam Pirin 34 126 IPR003829 -
Lele27g0566 305 Gene3D Jelly Rolls 27 283 IPR014710 -
Lele27g0566 305 PANTHER PIRIN-RELATED 3 299 IPR012093 -
Lele27g0566 305 Pfam Pirin C-terminal cupin domain 179 287 IPR008778 -
Lele27g0566 305 CDD cupin_pirin_C 176 256 - -
Lele27g0566 305 FunFam pirin 27 164 - -
Lele27g0566 305 Gene3D Jelly Rolls 148 257 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0566 Lele-ChrLele27 13301757 13305935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0566 14 293 Calmodulin-binding Proteins AT3G59220 58.007 2.30e-121 348