Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0559 ATGCATAATCAAGAAATTTGCAGTTCAATGAAGGAATCTCGTCTTGTTGCGAAGAAATTCTTGGCCAGGCCTCAACATGAAGGCGTTGGGGCTGTTGTTAGAAGAAGCATTGGACGGTTTGAGCTCAAGTACTTTGATCCTTTTCTGCTGTTGGATGAATTCTCAGTTTCTGCTCCAGCTGGGTTCCCTGATCATCCACATAGAGGGTTTGAGACAGTCACATATATGTTACAGGGAGCCATAACGCATGAGGATTTTGAAGGGCACAAAGGAACGATTGAAGAAGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAGATGCCTGCAGCTCAGGGAATTCAAAAGGGTCTTCAGCTTTGGATCAATCTTGCGTCCAATCATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGGAGAGGAAAACGGCATTAAACACCCTATTTCAAAGTCATGGAATGCTTTTGTCTATGTTTTGGAAGGAGAAGGTGTGTTTGGCAACAAGAAATCTCAACCTGTCTCTTCACACCATATTCTTCTTCTTGGTTCTGGGGGAGATGGTCTTGAAGTATGGAACAAGTCTTGTAATAACAATAAGGTGCTTAGGTTTGTTCTTGTTGGAGGCCAACCATTGGGTGAACCTGTGGCTCAGTTTGGACCCTTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATCGATGACTTTGATAATTGTGTCAATGGGTTCGAGAAAGCTAGGCATTGGAAATCTGAGGCTGCAATTAGTCTTGATTTTTAA 813 0.4293 MHNQEICSSMKESRLVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLLLDEFSVSAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEEGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASNHKMIEPRYQEMLSKDIAEGEENGIKHPISKSWNAFVYVLEGEGVFGNKKSQPVSSHHILLLGSGGDGLEVWNKSCNNNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFDNCVNGFEKARHWKSEAAISLDF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0559 270 Gene3D Jelly Rolls 155 222 IPR014710 -
Lele27g0559 270 CDD cupin_pirin_N 31 128 - -
Lele27g0559 270 Pfam Pirin 33 126 IPR003829 -
Lele27g0559 270 CDD cupin_pirin_C 155 221 - -
Lele27g0559 270 PIRSF Pirin 149 261 IPR012093 -
Lele27g0559 270 PIRSF Pirin 12 156 IPR012093 -
Lele27g0559 270 FunFam pirin 27 175 - -
Lele27g0559 270 Gene3D Jelly Rolls 27 147 IPR014710 -
Lele27g0559 270 Gene3D Jelly Rolls 223 248 IPR014710 -
Lele27g0559 270 SUPERFAMILY RmlC-like cupins 14 262 IPR011051 -
Lele27g0559 270 Pfam Pirin C-terminal cupin domain 153 252 IPR008778 -
Lele27g0559 270 PANTHER PIRIN-RELATED 3 155 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0559 Lele-ChrLele27 13239034 13245714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0559 14 258 Calmodulin-binding Proteins AT3G59220 51.601 3.73e-95 280