Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0554 ATGGTGATGGCGATACTGAATTGGATACCGGACACTGCGAAGACCTTCGCTCACGAGCACGCACAGGGATGTATTGCTGGAGGGATACTCTTGTTCATCACCAAGGGGAAGAGTTCTCGCATCCTTACATTTGATGAAGAACTGTTCTTCATATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTTTTGACAATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAACATTTATTATTGTATCTGCTATAGGAACAATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTGTACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCGACGTCAGTTGTTCTCTTCAATGCAGTGCAGAAGCTTGATGCTTCAAAAGTTCATGGTAGGGCACTCCATGTCGTTGGACATTTCTTGTATCTGTTCTCCATAAGTACTGCTCTAGGATTCCCTTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTCACCGTTTTCTTCTGCGGAATATTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGGCGTGCTTATAGAGACTCAAGGATCACATTTAGGCATCAGATAATCATTTGGTGGGCTGGGCTTATGAGGGGGGCAGTCTCCATTGCTCTGGCTTTCAAGCAGTTCACATATTCTGGAGTTACATCTGATCCTGTTGATGCAACAATGATCACCAACACCATCATTATTGTGCTTTTTAGCACACTGGAATCTGGTCCTCTTGCCGAGGACTTGAATCTGCCATTTCTATCCTTTAAGGAGTCAGCAGCAACGAACATTAGTCGTGCAAAGGAAAGTCTGTCCATGTTAATAGGAAGTCTTGTTTACACCATACATCATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG 1065 0.4235 MVMAILNWIPDTAKTFAHEHAQGCIAGGILLFITKGKSSRILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTFIIVSAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVHGRALHVVGHFLYLFSISTALGFPSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRRAYRDSRITFRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVDATMITNTIIIVLFSTLESGPLAEDLNLPFLSFKESAATNISRAKESLSMLIGSLVYTIHHYWRRFDDAYMRPIFGGPLA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0554 354 Pfam Sodium/hydrogen exchanger family 23 224 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele27g0554 354 PANTHER SODIUM/HYDROGEN EXCHANGER 233 349 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele27g0554 354 Gene3D - 93 141 - -
Lele27g0554 354 PRINTS Na+/H+ exchanger signature 62 76 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0554 354 PRINTS Na+/H+ exchanger signature 48 59 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0554 354 PRINTS Na+/H+ exchanger signature 77 85 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0554 Lele-ChrLele27 13114695 13120235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0554 228 352 Antiporters AT5G55470 57.143 1.11e-52 180