Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0551 ATGGTGATGGCGATACTGAATTGGATACCGGACACTGCGAAGAACTTCGCTCACGAGCACGCACAGGGATGTATTGCTGGAGGGATACTCTTGTTCATCACCAAGGGGAAGAGTTCTCGCATCCTTACATTTGATGAAGAACTGTTCTTCATATATCTTCTGCCACCCATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTTTTGACAATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAACATCTATTATTGTATCTGGCAGCTTGTGGCTATTTCCCAAATTAAACTTTGTTGGTCTGAGTGTGCAAGATTATCTTGGTGAGATTTCTTCTATAGGAACAATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTGTACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCGACGTCAGTTGTTCTCTTCAATGCAGTGCAGAAGCTTGATGCTTCAAAAGTTCATGGTAGGGCACTCCATGTCGTTGGACATTTCTTGTATCTGTTCTTCACAAGTGCTGCTCTAGGATTCACTTCAAGTGTTCGTGAAATTGCATTGATGGTTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTTACCGTTTTCTTCTGCGGAATATTAATGTCACACTATGCATGGCATAATGTGACTGAAACTTCAAGAGTCACAACCAGAAACCTTTATATTTCTATACGTGGGCATGGATGCTCTGGACATGGGGAAGTGGAGGATTACCAAATTAAGTTCAACTTGTATGAGCCCCGAAGAGATAAGACTCTTAAGGGTCAGTCGCTGGGGACTGCCATCATAGACTTGGCAGATTATGGTATACTTAAGGAGAACTTGAGCATTAGTGCTTCGATGAACTGCAAGAGGAACTACAAAAACACAGCTGTTGCTTCTGCCTAG 993 0.4179 MVMAILNWIPDTAKNFAHEHAQGCIAGGILLFITKGKSSRILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTSIIVSGSLWLFPKLNFVGLSVQDYLGEISSIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDASKVHGRALHVVGHFLYLFFTSAALGFTSSVREIALMVLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRVTTRNLYISIRGHGCSGHGEVEDYQIKFNLYEPRRDKTLKGQSLGTAIIDLADYGILKENLSISASMNCKRNYKNTAVASA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0551 330 Pfam Sodium/hydrogen exchanger family 23 248 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele27g0551 330 PRINTS Na+/H+ exchanger signature 77 85 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0551 330 PRINTS Na+/H+ exchanger signature 121 131 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0551 330 PRINTS Na+/H+ exchanger signature 62 76 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0551 330 PRINTS Na+/H+ exchanger signature 48 59 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele27g0551 330 PANTHER SODIUM/HYDROGEN EXCHANGER 23 255 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele27g0551 330 Gene3D - 116 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0551 Lele-ChrLele27 13074177 13080332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0551 23 256 Antiporters AT5G55470 69.841 1.91e-112 335