Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0543 ATGGCTCCAAAAAGAGGTGTAAAAGCTCCGGTTACGGTTGCTAAGAAGAAGCAGGACAAGGTGGTGAACCCGCTATTTGAGAAGCGTCCGAAGCAGTTTGGGATTGGAGCAACTAGCCTATTCAAGATGCTTCTTAAGTACAGGCCAGAGGATAAAGCCGAAAAGAAAGAGCGACTCTTGAAGAGGGCCCAGGCAGAGGCTGAAGGAAAATCTACTGAAGCTAAGAAGCCTATTGTGGTGAAATACGGTCTTAATCATGTCACTTACCTTATCGAGCAGCTGGTTGTGATTGCACATGATGTAGATCCAATTGAACTGGTTGTCTGGCTGCCAGCATTGTGCAGAAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCACGCTTGGGAACGATTGTCCACAAGAAAACTGCGTCAGTTCTGTGCTTGACAACAGTCAAGAATGAAGACAAACTAGAATTCTCTAAGATTCTAGAGGCGATCAAGGCCAACTTCAATGACAAGTACGACGAGTACAGAAAGAAGTGGGGTGGTGGAATTATGGGATCTAAATCCCAAGCCAAGACTAAGGCCAAGGAAAGGCTTCTTGCCAAGGAAGCTGCACAGAGAATGTCTTAA 621 0.4589 MAPKRGVKAPVTVAKKKQDKVVNPLFEKRPKQFGIGATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKSTEAKKPIVVKYGLNHVTYLIEQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0543 206 ProSitePatterns Ribosomal protein L7Ae signature. 114 131 IPR004037 GO:0042254|GO:1990904
Lele27g0543 206 Gene3D - 35 200 IPR029064 -
Lele27g0543 206 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 67 153 IPR004038 -
Lele27g0543 206 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 28 189 - -
Lele27g0543 206 Coils Coil 53 73 - -
Lele27g0543 206 SUPERFAMILY L30e-like 40 177 IPR029064 -
Lele27g0543 206 PRINTS Ribosomal protein L7A family signature 133 157 IPR001921 -
Lele27g0543 206 PRINTS Ribosomal protein L7A family signature 165 185 IPR001921 -
Lele27g0543 206 PRINTS Ribosomal protein L7A family signature 5 22 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0543 Lele-ChrLele27 12923528 12925549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0543 1 206 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 68.340 3.27e-119 337