Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0524 ATGGAAGCCCATTCTTCTCCCCCAACGACGTCGTTTCTTCACCAGAAACATCACCTCCACGAGATGGATTTCTTCTCTGACAAAAAGACCAAGACTGTTGATCATGCGAGTTTAGATCTTGCGACTAAGAATTCCAGCAGCAACAGATCATCGACTGTGGATGATGGAGCATCAGACTCCATGGAAGATAACAAGAGAAAAGAGGCATCTTTGTTAGCTGAATTGCAGCATATGAAAGCTGAAAATCAACGTATGAGAGATTTGCTTGATCATGTGAACTTAAACTACAATACCCTGCAATTGCGACTTATCAATCTCAAGCAGACACACACTAATGAGGTAGGAGAAGCTGCAGGCAGTGAAGATCATCACATTGAGAGGAAAGGAGGAATGATGATAAGGCCATTATTAGTTGAAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGTAGTGAAGGCAAATTGATGATGAGAGAAAACAAAAGCCATAACAATATGCTTGATTTAATGGAATGCGTCAAGATTGAGAAGAGCACAGACAGTAGTGATCATCATCATCATGCAAAAGCCACTTCATCAGATACCATATCACTCGTAAGGAAAGCTCGTGTATCAGTTCGAGCACGTTCAGAGACTCCAATGATATCAGATGGATGCCAATGGAGAAAGTATGGGCAAAAGATGGCAAAAGGAAACCCTTGCCCACGAGCTTATTATCGTTGCTCTATGGGAATTTGTTGTCCTGTACAGAAGTGTGCCGAAGATAGAAGCATTCTGATAACTACATACGAAGGACAGCACAATCATCCACTTCCTCCAGCTGCCAAAACTATGGCTTCCACAACATCTTCGGCTGCTTCAATGCTTCTTTCAGGATCAATTCAAAGTTCAGATCATCATCTTCTAAATAACCTCATAAGTCCTAATCTTTTAGAAGGTGCTTCAATACTTGCTTCCTCACACAACATAGCTACTCTCACTGCCTCAGCTCCATTCCCCACCATAACTTTGGACCTTACTCGTCATCAAACCGCGCCGCTGAAGATTTTCGGTCAGACTCTGGGTGATCAACACTCTAGGGTTTCTCTGGGAACGACATCTTCGTTCACTGATACGGTGAATGCAGCCACGGCTGCTATTACCGCAGATCCCAATTTCACTGCAGCTCTTGTGGCTGCCGTTACTTCTATCATTGGAAGTTCCCAATCCAACAATAATAGTGGTTCTGATATTACTGCAAGTGGAAAACCCTAG 1395 0.3993 MEAHSSPPTTSFLHQKHHLHEMDFFSDKKTKTVDHASLDLATKNSSSNRSSTVDDGASDSMEDNKRKEASLLAELQHMKAENQRMRDLLDHVNLNYNTLQLRLINLKQTHTNEVGEAAGSEDHHIERKGGMMIRPLLVEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHNNNNNNNNNNNNNNNNNNNNNNNNNNKSSEGKLMMRENKSHNNMLDLMECVKIEKSTDSSDHHHHAKATSSDTISLVRKARVSVRARSETPMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGICCPVQKCAEDRSILITTYEGQHNHPLPPAAKTMASTTSSAASMLLSGSIQSSDHHLLNNLISPNLLEGASILASSHNIATLTASAPFPTITLDLTRHQTAPLKIFGQTLGDQHSRVSLGTTSSFTDTVNAATAAITADPNFTAALVAAVTSIIGSSQSNNNSGSDITASGKP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0524 464 Coils Coil 61 95 - -
Lele27g0524 464 Pfam WRKY DNA -binding domain 264 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0524 464 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 454 IPR044810 GO:0003700
Lele27g0524 464 Gene3D WRKY domain 247 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0524 464 SMART WRKY_cls 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0524 464 MobiDBLite consensus disorder prediction 172 199 - -
Lele27g0524 464 ProSiteProfiles WRKY domain profile. 257 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0524 464 MobiDBLite consensus disorder prediction 37 55 - -
Lele27g0524 464 SUPERFAMILY WRKY DNA-binding domain 255 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0524 464 MobiDBLite consensus disorder prediction 138 199 - -
Lele27g0524 464 MobiDBLite consensus disorder prediction 36 65 - -
Lele27g0524 464 MobiDBLite consensus disorder prediction 138 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0524 Lele-ChrLele27 12428327 12434436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0524 53 445 WRKY Transcription Factor Family AT4G04450 38.964 4.62e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele27g0524 WRKY 3.6e-17 CL0274