Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0476 ATGGCTGGGATTGATGATAATGTTCCTTTAACTAGCGAGTGGGGTCATCCTAGTCCGAGTCCAAGAACCTTTTTCTCTAAGATGTTAGGTGAAGATAATCTTACAAGACAAATCTCAGAGCATCCTGGAAGTGGTAGAACTGAGGAGCCATTTCTGCAACAAAACCAAGAGCTCATTATGACAGGAAATTTCAGCACAACTTCTTTGTCTGAGAATAAGTCTAGCTCAAGAGGGAACCTTGTTGAAAGGATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCTGATCCTACTATCAATTCGGATACTCGATCTGCTTACTTTACCATACCGCCTGGCCTCAGTCCAACCACGCTATTAGAGTCTCCAGTGTTCCTTTCTAATTCACTGGCACAACCGTCTCCAACAACTGGAAAGTTTCCATTTATCTCAAATGGCAACTTCCGGGGTTCGGAACTGAACTCTGGCGCCCCTGAAAAAACTAAAGATAACAACTTTGATGACATTTATGCATCAACGTTTGCTTTCAGGACTACCACAACAGATTTGGGCTCTTTCTATAATGGTGATGCTAGAAAAATGAATCCGATGATGCTGCCAGAAAAATATCTCACTGCTGAGGTCTCAGCTTCAGACATGACTGATCCTCCTACTCAAAATGATAGTACAGCATCAGTTGAGGAACCGGCAGATGAAGAGGGAGGTCAAAGAGGAAATGGGGATTCACAAGCTGCTGGCGTTGGGGGCACACCATCTGAAGATGGATATAACTGGAGAAAGTACGGACAGAAACAAGTTAAAGGTAGTGAGTATCCGCGAAGTTACTACAAATGTACACATACAAATTGTACGGTAAAGAAGAAAGTGGAGCGATCTCATGAGGGCCACATAACAGAAATCATCTACAAGGGAAATCACAACCATCCAAAACCGTCCACAAATCGCAGATCTGCAATAGGGTCTGTTAACCCTATCTGTGACATGCAAGCGGATGCAACTGAAAGTACCGAGCCGCATGGTGGGGGTGATGGTGAACTGGGCTGGGCAAGCACAAAAAAAGGAAATATGGCTAGAAATGGTGATGGCAAGCATGAGAACCTTGAAGTGACATCTTCAGCAGCATCTGTGGGCGGCCCTGAATTCGGCAACCAGTCCACCAATTTGGCCAGTCAGAATGGTACTCAATTTGAATCAGGAGATGCAGTGGATGCCTCATCTACTTTCTCTAACGATGAAGATGATGATGATAGGGCCACTCATGGAAGCGTATCAGTAGGTTATGATGGAGAAGGAGAGGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTTCAAACTACCAGCGAAGTTGATATCCTTGACGATGGATATCGTTGGCGTAAATACGGACAAAAAGTTGTCAAAGGAAATCCCAATCCCAGGAGTTACTACAAGTGCACCAATGTCGGTTGCACAGTAAGGAAGCATGTTGAGAGAGCATCACATGACCTCAAATCTGTGATCACTACATATGAAGGAAAGCACTATCATGATGTTCCTGCAGCTCGCAATAGCAATCAAGGCAACGCTGCAGCTTCTAGTGCTGCTACTGGTCAAGCTTCTTCTGTTATTCAGAGTCACAGAGCTGAAGCTTCACAAGTTCATAACAGTATTGGGAGGCTTGATAGGCCTGTTTTGGGCCTGGGCACGTTCAACTTTCCCGGATCTGGGCCTGGTCCTGGCAGGCCACAGCTCGGGCCTTCCCCTGGCTTTTCCTTTGGAATTGGTATGAATCAATCAGGATTCCCCAACCTGGCCACCATGGCAGCTTTGGGCCCGGCCCATGCCAAGCTTCCAGTCATGCCCATTCATCCGTTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTTGCCCAAAGGGGAGGCCAATTTGGAGCCCATTCCAGATCGTGGGCTTAATATGCCTGCTGGTTCATCAGTATATCAAGATATAATGAGTCGGATGCCACTTGGACCTCATATGTAA 2094 0.4585 MAGIDDNVPLTSEWGHPSPSPRTFFSKMLGEDNLTRQISEHPGSGRTEEPFLQQNQELIMTGNFSTTSLSENKSSSRGNLVERMAARAGFNAPRLNTESIRSADPTINSDTRSAYFTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFISNGNFRGSELNSGAPEKTKDNNFDDIYASTFAFRTTTTDLGSFYNGDARKMNPMMLPEKYLTAEVSASDMTDPPTQNDSTASVEEPADEEGGQRGNGDSQAAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCTVKKKVERSHEGHITEIIYKGNHNHPKPSTNRRSAIGSVNPICDMQADATESTEPHGGGDGELGWASTKKGNMARNGDGKHENLEVTSSAASVGGPEFGNQSTNLASQNGTQFESGDAVDASSTFSNDEDDDDRATHGSVSVGYDGEGEESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCTVRKHVERASHDLKSVITTYEGKHYHDVPAARNSNQGNAAASSAATGQASSVIQSHRAEASQVHNSIGRLDRPVLGLGTFNFPGSGPGPGRPQLGPSPGFSFGIGMNQSGFPNLATMAALGPAHAKLPVMPIHPFLPNQRPPNMGFMLPKGEANLEPIPDRGLNMPAGSSVYQDIMSRMPLGPHM 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0476 697 ProSiteProfiles WRKY domain profile. 261 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 FunFam WRKY transcription factor 250 320 - -
Lele27g0476 697 ProSiteProfiles WRKY domain profile. 476 541 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 MobiDBLite consensus disorder prediction 438 452 - -
Lele27g0476 697 Pfam WRKY DNA -binding domain 261 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 Pfam WRKY DNA -binding domain 482 538 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 MobiDBLite consensus disorder prediction 543 574 - -
Lele27g0476 697 MobiDBLite consensus disorder prediction 218 267 - -
Lele27g0476 697 SUPERFAMILY WRKY DNA-binding domain 258 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 SMART WRKY_cls 481 540 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 SMART WRKY_cls 260 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 Gene3D WRKY domain 468 534 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 MobiDBLite consensus disorder prediction 540 610 - -
Lele27g0476 697 MobiDBLite consensus disorder prediction 340 455 - -
Lele27g0476 697 FunFam WRKY transcription factor 33 468 534 - -
Lele27g0476 697 MobiDBLite consensus disorder prediction 374 414 - -
Lele27g0476 697 MobiDBLite consensus disorder prediction 219 233 - -
Lele27g0476 697 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 128 560 IPR044810 GO:0003700
Lele27g0476 697 Gene3D WRKY domain 253 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 SUPERFAMILY WRKY DNA-binding domain 473 541 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0476 697 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0476 Lele-ChrLele27 5970682 5974407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0476 1 692 WRKY Transcription Factor Family AT5G56270 50.136 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele27g0476 WRKY 9.8e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1642 25 21999419 22003187 Lele27g0476 27 5970682 5974407 hybridization
Lele26g1618 26 18634026 18637718 Lele27g0476 27 5970682 5974407 hybridization