Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0461 ATGGAGTCGGACCTTTGCGTGAATGCTTCGTGCCGAGCGGTCACTGCTCACGAATGGAAGAAGGGGTGGCTGCTGCGATCTGGTGGATTTGCCAGACTCTGTGATAAGTGCGGAGCTGCCTATGAAAATTCGGTTTTTTGTAAAATGTTCCACCTTGAAGAATCTGGTTGGAGGGATTGCAACTTCTGCAAAAAGCCTATTCACTGTGGATGCATAGTATCTAAATCTTTGTTCGAGTACCTTGATTTTTGTGGTATAGGCTGTATTAGCTGTGTAAAGTCTCCCCAACTTCATTTGATGCAAAATAGTGAAATTTCTAATGGGTCTATTGCATCAACCAAAAATGTTGCAAGTGACCGACATTCGTCTCATATTGATGGTAGAATCTCTGTGGATAATGTTCATGAAGGGAAACTCATGCAACTGTGCAAAATTGTTGAGGCTAGTGAATCTAGCCACTGGTCACCAGTTCAGAGAGATGGGATACTTTTATCTACTGGCCAGAACAGCCAGGAAGTTAAGCACCCGACCAGGGAAGTGGATCCAGGATTTTCAAATGTGATGAGTCCATCTGTTCAGTCATTAACATTTTCAAAACTAGAAAATAGCAGACTGGCATGGGAGCTGAAAAATATGCATGAATTGCCTATACAGCCATCATTGTGTATGTCTCTGAGAACTCCATCACGAAACTCTGTCCTGCCTTCTGCTGGAGAGATTTTAGAAGGAAGAAGTGAGGAAAAGCCATCTTCCTTTCATCACGGGCAAAGGTCTCGGCCTATATTGCCGAAACCACCAAAGACTGGACTAACCATAAATCAAGAAACAAATAAAGGCGTGCTTTCTCAGCCACGAATATCCCGGCCACCTGCTGAGGCAAGGGGCAAGAATCAGTTGCTTCCTCGATACTGGCCCAGGATCACTGATAAAGAGCTGGAGCAATTGTCTGGAGATTTAAAGTCTACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAATCAGAAGGTCTTCCTTTGCGGATCCAAGATGTGAAGGGGAACGAGTGGACATTTCAGTTTCGATTTTGGCCTAATAACAACAGTAGGATGTATGTGTTAGAGGGTGTCACTCCCTGCATACAGTCCATGCAATTACGTGCTGGTGATACTGTAATATTTAGTCGGATAGATCCTGGGGGCAAACTTGTTATCGGTTTCAGGAAGGCATCCAATTCTGTAGATACACAGGATGCCTCTACATCCGCACCTTCAAATGGCATTTCAATGAAGGATGCTTCTTGTTCTGGGTATGATGAACCTCCTGTTTTTGGAAAGAGGACTTTTTTCTCCACACATCCATCTGGGAGACAAGATCAATGGGCTCAATGTGATGATTGCTGTAAATGGCGAAGGCTGCCAATAGATGTTCTACTTCCTCCTAAGTGGACATGCTCAGAAAATGAGTGGGATGATAGCAGGTATCTATGTTCGGCACCAGAGGAGCTCAGTCCAAAGGAGTTGGAAAATCTTCTGAGATTTACCAAAGGTTTTAAGAAGAGAAGAATTGCAGAAGACAGGAAGTCACCCCAAGAGCATGGAACTTCCGGCTTAGATGCTCTTGCCACAGTGGCAGTTTTAGGAGATAATTTTCTTGACCCTGCTGAGTCATCTGCCGGAATCACCACGAAACATCCTCGACACCGTCCAGGATGCACCTGCATAGTGTGCATCCAGCCACCAAGTGGGAAGGGGAGACACAAACCGACATGTACTTGCAACGTGTGCATGACTGTGAAACGCCGTTTCAAAACCCTTATGATGCGTAAAAAGAAACGCCAATCAGAACGTGAAGCAGATGCCACTACCGAGAAGGAACAAGTCCACCTGAGGGATGAATCCGAAACGAATGGCGCTTCAAGAGACGATGATACGGTTTGTATAGAAAAAGTGGGAGGCTTAGTCAGCAGTCATCCTGAGGTCAGTGAACCCAGTAATGGACAAATAGATCTGAATTGTCATCCTAAACGTGAAGACATGCTAGTTGATGCAACAGAACTGAGCATGACAAGTAGTCATCTTGAAACAACTAACTATCTACCATAA 2157 0.4474 MESDLCVNASCRAVTAHEWKKGWLLRSGGFARLCDKCGAAYENSVFCKMFHLEESGWRDCNFCKKPIHCGCIVSKSLFEYLDFCGIGCISCVKSPQLHLMQNSEISNGSIASTKNVASDRHSSHIDGRISVDNVHEGKLMQLCKIVEASESSHWSPVQRDGILLSTGQNSQEVKHPTREVDPGFSNVMSPSVQSLTFSKLENSRLAWELKNMHELPIQPSLCMSLRTPSRNSVLPSAGEILEGRSEEKPSSFHHGQRSRPILPKPPKTGLTINQETNKGVLSQPRISRPPAEARGKNQLLPRYWPRITDKELEQLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPGGKLVIGFRKASNSVDTQDASTSAPSNGISMKDASCSGYDEPPVFGKRTFFSTHPSGRQDQWAQCDDCCKWRRLPIDVLLPPKWTCSENEWDDSRYLCSAPEELSPKELENLLRFTKGFKKRRIAEDRKSPQEHGTSGLDALATVAVLGDNFLDPAESSAGITTKHPRHRPGCTCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREADATTEKEQVHLRDESETNGASRDDDTVCIEKVGGLVSSHPEVSEPSNGQIDLNCHPKREDMLVDATELSMTSSHLETTNYLP 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0461 718 MobiDBLite consensus disorder prediction 672 691 - -
Lele27g0461 718 MobiDBLite consensus disorder prediction 628 662 - -
Lele27g0461 718 MobiDBLite consensus disorder prediction 244 272 - -
Lele27g0461 718 SMART B3_2 327 428 IPR003340 GO:0003677
Lele27g0461 718 Gene3D - 475 530 - -
Lele27g0461 718 ProSiteProfiles B3 DNA-binding domain profile. 327 428 IPR003340 GO:0003677
Lele27g0461 718 FunFam B3 domain-containing transcription repressor VAL1 305 432 - -
Lele27g0461 718 SUPERFAMILY DNA-binding pseudobarrel domain 325 427 IPR015300 -
Lele27g0461 718 ProSiteProfiles Zinc finger CW-type profile. 472 522 IPR011124 GO:0008270
Lele27g0461 718 Pfam B3 DNA binding domain 327 427 IPR003340 GO:0003677
Lele27g0461 718 Gene3D - 305 432 IPR015300 -
Lele27g0461 718 MobiDBLite consensus disorder prediction 624 662 - -
Lele27g0461 718 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 441 - -
Lele27g0461 718 CDD B3_DNA 325 426 IPR003340 GO:0003677
Lele27g0461 718 Pfam CW-type Zinc Finger 477 519 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0461 Lele-ChrLele27 5626897 5639380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0461 455 659 B3 DNA Binding Superfamily AT2G30470 58.216 1.21e-72 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele27g0461 B3 4.1e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0461 27 5626897 5639380 Lele01g1031 01 5963318 5966398 CCT
Lele27g0461 27 5626897 5639380 Lele03g1032 03 5984042 5987204 CCT