Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0454 ATGGGAAATCACAGGTTCAAATTTTCTGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAAGAAGAAGAACAATGCAAGTTCAGTGACACCATCTCTGAGATCGCAGCCAAGGTGTTCCAATTATTTCCCCAGTGAAATGAGTATTAGTAGACCTGGTAAGTTGTATAATTCTCCCATTTTCAGTACCAGAGGAGCTTCTGAGATTCCATTCATTGATTCTCCAAGAAGGTCTTCCAAAAGAAGAACAAGGAGAAGAACAGTTTATTACAAGCCTTCTTCTCCAAGACTTGTTTCTTCTTCCGTTTCTGCAACTTCTAGCTGCCACTCCACTAATAATTGGCCTCATCAACCCAATCATCAAACTCAGTCACCTGATTACTATATCTCCTCTGTTGAGAGCTCCTCTGAATCAGACCTTCATGATGATATTGTTTCTTCTGAATCTGAGTGTGATGATGATAGTTTTTCTGCTGCTGATAATGCTCCTGCTGATATGTTCAATGGGTTACCCTCAAATTGCAGTTGCAGAGTTAGTTATTCTACCAATGATATTATCATTGACATGAACAATGAAGTACCCTTTCAAGTGAATTCTGAGAAACTTGATGGGTTTGAAACAATTTCAGAGTTGGATCTTCCTCCAATCTTGACAAAGCAGCCATTAAAGTTCGATGATGATGATCATGAGAAGGTCATTAAGGCCACCACTGAATTGAGAAGTTCATCCAAGTCACAATCTGTCAACAAGGGCTTCAAGAAAGAAAGCATTAGAAAAACTCAAAGAGATCGAAGATCGAGTCATAATAATAACAATGATAGAAGATCGTCGGTTAATTCTTCTACAGGAATCAGACTCAGAGTGAATTCTCCAAAGCTAGCAGCAAGCAGAAAAGTCCAAGCTGCTTCTTCTGCAAGAAGAAGGAATAATAATAATAATAATGCAGGATTCCCAGAGGGTTTTGCAGTAGTGAAGTCGTCATTTGATCCACAGAGAGACTTCAGAGATTCAATGTTGGAGATGATTATGGAGAACAACATAAGGGCATCGAAGGATTTAGAAGATTTACTTGCATGCTATCTTTCACTGAATTCAAGTGAATACCATGAGCTCATTGTCAAAGCATTTGAGCAAATCTGGTTTGACATGGCTCAACTCAAATTGTAA 1185 0.3857 MGNHRFKFSDMIPNAWFYKLKDMSRSKKKNNASSVTPSLRSQPRCSNYFPSEMSISRPGKLYNSPIFSTRGASEIPFIDSPRRSSKRRTRRRTVYYKPSSPRLVSSSVSATSSCHSTNNWPHQPNHQTQSPDYYISSVESSSESDLHDDIVSSESECDDDSFSAADNAPADMFNGLPSNCSCRVSYSTNDIIIDMNNEVPFQVNSEKLDGFETISELDLPPILTKQPLKFDDDDHEKVIKATTELRSSSKSQSVNKGFKKESIRKTQRDRRSSHNNNNDRRSSVNSSTGIRLRVNSPKLAASRKVQAASSARRRNNNNNNAGFPEGFAVVKSSFDPQRDFRDSMLEMIMENNIRASKDLEDLLACYLSLNSSEYHELIVKAFEQIWFDMAQLKL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0454 394 Pfam DNA-binding domain 1 37 IPR025830 GO:0003677
Lele27g0454 394 MobiDBLite consensus disorder prediction 308 323 - -
Lele27g0454 394 Pfam Transcriptional repressor, ovate 333 389 IPR006458 -
Lele27g0454 394 MobiDBLite consensus disorder prediction 29 51 - -
Lele27g0454 394 MobiDBLite consensus disorder prediction 76 132 - -
Lele27g0454 394 MobiDBLite consensus disorder prediction 28 51 - -
Lele27g0454 394 MobiDBLite consensus disorder prediction 99 132 - -
Lele27g0454 394 MobiDBLite consensus disorder prediction 257 277 - -
Lele27g0454 394 MobiDBLite consensus disorder prediction 278 293 - -
Lele27g0454 394 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 187 389 IPR038933 GO:0045892
Lele27g0454 394 MobiDBLite consensus disorder prediction 243 326 - -
Lele27g0454 394 ProSiteProfiles OVATE domain profile. 329 388 IPR006458 -
Lele27g0454 394 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 327 389 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0454 Lele-ChrLele27 5159215 5160399 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele27g0454 Ovate 2.2e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1633 26 19263716 19264900 Lele27g0454 27 5159215 5160399 hybridization