Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0450 ATGTCCAGATCATACAATTTTACTTCATTGAGAAGAAATACTAGTACTCTTCTTTTGTTCCATCGTCACTCCTTGAATTATTTCGGTTTCCTGTTTCCTGTTTCCCTTCGCTCTCAAATCTTCATCATTTCGTCTGGATCGGTGATCTTCAACGATCTGCTTCAGCTTCTTCTTAAGCTCATCCTATTGATTGTCATTGAGATTGGCACTTACCGTAATGCCAAACGATGTGCCTTCATGATGAAAGTTCTGTCTTTGAGATCCATAAGTGCTAGTGTATTATTTCATCATACTGTGAGATTCGACATGGAGAATAAACCAAAAATATTAATGCAAAAGTATGAATTAGGAAGGTTACTAGGCCAAGGTACCTTTGGAAAGGTATATTTTGCCCGCAGTACGATAACTAACCAAAGTGTAGCTATTAAAGTGATAGGCAAGGACAAAGTTTTGAAATCTGGACAAACTGAACAGATCAAGCGGGAAATATCTGTAATGCGACATGTTAAACATCCCAATGTTATACAGCTTTATGAGGTTATGGCCACCAAAAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAGCTCTTTGACAAGGTGGCCAAAGGAAAGCTTAAAGAAGATGTTGCCCATAAATTATTTCAGCAGCTGGTGAATGCCATAGACTTTTGTCATAGTAGAGGTGTTTACCACCGTGACATAAAACCGGAGAACCTTTTGTTGGATGAAAATGGGAACCTAAAGGTCTCTGATTTCGGATTGAGTGCTCTAGCTGAATCCAAGAGACAGGATGGCTTACTACACACGCCTTGTGGCACACCTGCCTATGTTGCTCCCGAAATCATCAAAAGGAAAGGTTATGATGGTGCCAAAGCTGATACTTGGTCTTGTGGAGTAGTTTTGTTTGTCTTACTGGCAGGTTATCATCCTTTTCATGATTCAAATTTGATAATGATGTATAGGAAGGTTTCCAAGGCAGACTATAAATTCCCTAGTTGGTTCTCCCCAGAAGTTCGTAGACTGTTAATGAAGGTTTTGGATCCAGATCCTAATACTAGAATCCCCCTAGCTAAGATTAAGGAATCTTATTGGTTTATGAAAGGGCCATCTTCTAGAGATAGGAAATCTGAATGTGTGAACAAGAGTGTCTCGACATCAGGTACAAAGCCTTGTGATCAAACCGAAGAAAGTGATAGCATAGAAGAAGCAGCTACACAAGAGTTAGTTGTGCCCACAAGTATAAATGCTTTTGACATCATCTGCCGTTCTAAAGGTTTTGATCTATCAGGATTCTTTGAAGATAGTTTCAAGAAGAGAGAAGCCAGATTTTCTTCAAGGCAATCATCCTCAGTCATTATCTCCAAGCTAGAAGAAATTGCCAAGCGTCTGAAGCTGAAAATAAAGAAAGGAGGTGCAGGTTTGTTGAAATTAGAGGGCCTGAAGGAAGGTAGAAAAGGGATTCTTAGCATTGACGTGGAGATCTTCGAGGCTGCTCCATCTTTCCATTTGGTTGAGATGAGAAAATCAAATGGAGACACTTTGGAATATCAGAGCATATTGAAAGAGGAAATTAGGCCTGCTCTTAAGGATATCGTTTGGGTTTGGCAAGGGGACCAGCAGCAACAATCACAACCATCAGAGGACCAGATACAGATGCATGACCAGCTGCAACCAGTGATAGCATCTACATCTATGACACATTCTTAA 1716 0.3992 MSRSYNFTSLRRNTSTLLLFHRHSLNYFGFLFPVSLRSQIFIISSGSVIFNDLLQLLLKLILLIVIEIGTYRNAKRCAFMMKVLSLRSISASVLFHHTVRFDMENKPKILMQKYELGRLLGQGTFGKVYFARSTITNQSVAIKVIGKDKVLKSGQTEQIKREISVMRHVKHPNVIQLYEVMATKSKIYFVIEYAKGGELFDKVAKGKLKEDVAHKLFQQLVNAIDFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALAESKRQDGLLHTPCGTPAYVAPEIIKRKGYDGAKADTWSCGVVLFVLLAGYHPFHDSNLIMMYRKVSKADYKFPSWFSPEVRRLLMKVLDPDPNTRIPLAKIKESYWFMKGPSSRDRKSECVNKSVSTSGTKPCDQTEESDSIEEAATQELVVPTSINAFDIICRSKGFDLSGFFEDSFKKREARFSSRQSSSVIISKLEEIAKRLKLKIKKGGAGLLKLEGLKEGRKGILSIDVEIFEAAPSFHLVEMRKSNGDTLEYQSILKEEIRPALKDIVWVWQGDQQQQSQPSEDQIQMHDQLQPVIASTSMTHS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0450 571 Pfam NAF domain 414 472 IPR004041 GO:0007165
Lele27g0450 571 SUPERFAMILY Protein kinase-like (PK-like) 110 398 IPR011009 -
Lele27g0450 571 FunFam Non-specific serine/threonine protein kinase 105 193 - -
Lele27g0450 571 Gene3D Transferase(Phosphotransferase) domain 1 194 373 - -
Lele27g0450 571 Pfam Protein kinase domain 114 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0450 571 FunFam Non-specific serine/threonine protein kinase 412 536 - -
Lele27g0450 571 Gene3D Kinase associated domain 1, KA1 412 537 - -
Lele27g0450 571 ProSiteProfiles Protein kinase domain profile. 114 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0450 571 SMART serkin_6 114 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0450 571 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 103 532 - -
Lele27g0450 571 MobiDBLite consensus disorder prediction 372 401 - -
Lele27g0450 571 ProSitePatterns Protein kinases ATP-binding region signature. 120 147 IPR017441 GO:0005524
Lele27g0450 571 ProSiteProfiles NAF domain profile. 412 436 IPR018451 GO:0007165
Lele27g0450 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lele27g0450 571 FunFam Non-specific serine/threonine protein kinase 108 408 - -
Lele27g0450 571 CDD CIPK_C 418 532 - -
Lele27g0450 571 Gene3D Phosphorylase Kinase; domain 1 105 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0450 Lele-ChrLele27 5049643 5052400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0450 103 544 CBL-interacting serine-threonine protein kinases AT5G58380 66.302 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele27g0450 Pkinase 1.8e-73 CL0016