Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0438 ATGGCTTCAATTGCTCTGCAATGGCTGAGCCTTGTGGGAATGATATGGCTTCAAGCTGTTAATGGCACAAACAACAACTTTCCTGCGTATTCCTCTCAGTTAAAGCAGCTTCTTTCTATATCTCAGTTACAGCTCAATAACTTAGCTTTCGCCTCCGACGCAGGAAAACTCTTCGGCTGGTTTTCCGGTGTCGCCGTCACATACCTTCCTCTTTGGCTTGTTCTCATCATTGGTTCAATTCTTGGGCTAATAGGTTATGGTGTGCAATATCTTTTCATAACAAACCATATCTCTTCTCTTTCATATTGGCATGTCTTCTTCCTCACAGTTCTAGCAGGCAACAGCATTTGTTGGATTAACACTGTCTGTTATGTTGTCACCATCAGAAACTTCCAATCCGATCACCGGCAAGTCGCCATCGGATTATCAACTAGTTACCAAGGATTAAGCGCCAAAATCTACACCAACATAGTTGAAACTTTTTCTCCACATAAAAAAGCTCAAACCTTTCTGTTTCTCAACTCTGTAACACCTCTTATAGTTAGCCTAATTGCAGCCCCTTTGGTTAGAGAAATCAAAACCTTAAAATCTTCAAATATGAGTGTTGGGTTCATTGTCATGTTTATGATCACCATTGGAACTGGGATTTATGCAGTGATCACCAGCTTACAGTTCATATCAGGAAAGTTGTCACCTTTGAGTAGTTTGATTGGAATTTTAGTTACCCTTTTGGTTCCTTTGTTAGTTCCAATCACAGAGAAGGTAAAATCATTAGTGGGGTCATGGCAAATGAACAGAGAGAGACAAAGAGTTTATAATTTTACTGCAGAAGAGAACAGTAATAATGGAGTTATCAGAACAGAGGAAGAAGTAAAAGATGAAGAAGATGAAGATGGTGATATTGGGGTTGGTGTGAGAGAAGAAATTGGGTGGAGATTGATGATGAGAAGGGTTGATTTCTGGTTATATTTCTTTGTGTATTTTTTTGGAGCAACGATTGGTTTGGTGTTTATGAACAACTTGGGACAAATTGCAGAATCCAGAGGTTGTTCTGCAACTTCATCTCTGGTTTCATTGTCGTCTTCTTTTAGTTTCTTTGGTCGTTTGATGCCTTCTCTCTTGGATTACTTCTACAGGGGAAAGTCCAGAATTATTTCAAGACCAGCTTCAATGGTGGCATTAATGGCGGCATCATCAGGATCATTCTTTCTACTTCTGAATCAGAAAGACATATCTCTCTACATAAGCACGGCCATGATTGGAATCTGCACTGGGGCCATAACTTCTATTGCTGTGTCCACAACCACAGAACTCTTTGGCACAAAGAACTTCTCAGTGAATCACAATGTGGTCGTCACCAACATCCCCATCGGCTCCTTCTTGTTCGGCATATCGGCCGCCCTCGTCTACCGGAAACAAGGCGATGGACACGGCGAATGCTCCGGCATGGATTGTTACAGAAGCACCTTCATCTTGTGGGGCTCTCTTTGTTGTTTAGGCACTGTCTTGGCCTTGATTCTTCATGCAAGAACTCGCAAATTTTACTCACAAAAGCGTTAG 1560 0.4147 MASIALQWLSLVGMIWLQAVNGTNNNFPAYSSQLKQLLSISQLQLNNLAFASDAGKLFGWFSGVAVTYLPLWLVLIIGSILGLIGYGVQYLFITNHISSLSYWHVFFLTVLAGNSICWINTVCYVVTIRNFQSDHRQVAIGLSTSYQGLSAKIYTNIVETFSPHKKAQTFLFLNSVTPLIVSLIAAPLVREIKTLKSSNMSVGFIVMFMITIGTGIYAVITSLQFISGKLSPLSSLIGILVTLLVPLLVPITEKVKSLVGSWQMNRERQRVYNFTAEENSNNGVIRTEEEVKDEEDEDGDIGVGVREEIGWRLMMRRVDFWLYFFVYFFGATIGLVFMNNLGQIAESRGCSATSSLVSLSSSFSFFGRLMPSLLDYFYRGKSRIISRPASMVALMAASSGSFFLLLNQKDISLYISTAMIGICTGAITSIAVSTTTELFGTKNFSVNHNVVVTNIPIGSFLFGISAALVYRKQGDGHGECSGMDCYRSTFILWGSLCCLGTVLALILHARTRKFYSQKR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0438 519 Gene3D MFS general substrate transporter like domains 196 514 IPR036259 -
Lele27g0438 519 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 516 - -
Lele27g0438 519 SUPERFAMILY MFS general substrate transporter 7 194 IPR036259 -
Lele27g0438 519 SUPERFAMILY MFS general substrate transporter 205 513 IPR036259 -
Lele27g0438 519 Pfam Nodulin-like 7 251 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0438 Lele-ChrLele27 4430584 4433125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0438 1 518 Nodulin-like Gene Family AT2G30300 49.716 1.66e-159 461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1651 25 23614616 23617173 Lele27g0438 27 4430584 4433125 hybridization
Lele26g1650 26 19670752 19673164 Lele27g0438 27 4430584 4433125 hybridization