Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0431 ATGGCAAGGCCAAGGATTCGCCTTCGAATTCCGAATCGCTTGATTCCTCCGAAGCTATGGAGATTTCTGGGTTTGTTTTCAAGCCTTGTTGGTCTTCTCTGTTATGCTTTGAGTTCCTCTTTCCACCAACTATTTGGTGAATGGAACTTTCTCAAGTTCATAATTTACTTTGTGGTAAGTTTATCTATCACCAGCTTATTCTTATTTTCTCAGAAATTGAGATTCTCAAGGAGTTTCTTGCTCAAAGTTCATCTGGGTTTCTTAGTTCTGATGCTCACAACATTTTACTCATTCTTGTACGATAAATCAATCAAAGGAAAACCAGACATATTCAGCTTGATTTCTTGTGCTTCCTTTGCTTTAATGTCCTTGAGCATATCAAAGCAGACCAACATCGGGTTCGAAGGTGATCTTCTCAATTTCTTCCTAGGTTTTCTCATCGTACAACTCATGAAACTTCACATGATGCTTGGCTTTGGAGCTGCGATTTTATGCTATTTCGTCATCGTTCTTCGTTCTCGTCCTAGTTCTGATCAATCGCAAGCTCAAGATCGCCAATCTGTATCACAAATAGAATTGGAAATTGATACTGTAAGAGGAACTGATGATACTAATAGTGATGATCATCAATCACAGATATTACAGAGAAGATTTGATGATGACGATGGGTACAATTGGAAGAAATATGAAGTAAAACAAGTGAAAGGAAATGAAAAGCAAATGATTTTCTACAAATGCTCAATCCCAAAATGCCAAGTAAAGAAGAAGGTCGAGAGGCATGTAAATGGACAGATCTGTGACGTGGTTTATAAAGGCACTCATAACCATGGCAAGCATACGGTTACATTAATGTTGAGAAACTCATCGTTTGAAACTCTTTATCCAAACCGACAATTGAAAACTTTCTTCTCTGATGAAGCCCCTTATCAACCATTGCAGACTCATGACAATGAAGAACTGGACCTGGTCGACTCGCCGGAGAGCTCATCAGTATCAAACAAAATGGTTTTGAGATTACCCTTACATCTAGAAAGGGTGATGAGGCAACAAATTGGATTGTTGCAGCTCGTGGAAAGACCAAGACCCCTTTCTGTTCGAATTTTAGCCAACGATGCTGAGTTAGGGAGGGATTCTGCAGATGGTGATGTTAAGCCTAGTGGAAAGGAAGTTGAGAAAAGTGGAACTGACTGA 1191 0.3946 MARPRIRLRIPNRLIPPKLWRFLGLFSSLVGLLCYALSSSFHQLFGEWNFLKFIIYFVVSLSITSLFLFSQKLRFSRSFLLKVHLGFLVLMLTTFYSFLYDKSIKGKPDIFSLISCASFALMSLSISKQTNIGFEGDLLNFFLGFLIVQLMKLHMMLGFGAAILCYFVIVLRSRPSSDQSQAQDRQSVSQIELEIDTVRGTDDTNSDDHQSQILQRRFDDDDGYNWKKYEVKQVKGNEKQMIFYKCSIPKCQVKKKVERHVNGQICDVVYKGTHNHGKHTVTLMLRNSSFETLYPNRQLKTFFSDEAPYQPLQTHDNEELDLVDSPESSSVSNKMVLRLPLHLERVMRQQIGLLQLVERPRPLSVRILANDAELGRDSADGDVKPSGKEVEKSGTD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0431 396 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 180 296 IPR044810 GO:0003700
Lele27g0431 396 Pfam WRKY DNA -binding domain 221 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0431 396 SUPERFAMILY WRKY DNA-binding domain 220 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0431 396 Gene3D WRKY domain 206 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele27g0431 396 ProSiteProfiles WRKY domain profile. 221 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele27g0431 396 MobiDBLite consensus disorder prediction 374 396 - -
Lele27g0431 396 SMART WRKY_cls 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0431 Lele-ChrLele27 4123582 4125358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0431 222 289 WRKY Transcription Factor Family AT2G37260 58.824 8.71e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele27g0431 WRKY 7.6e-16 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1660 25 24023440 24024441 Lele27g0431 27 4123582 4125358 hybridization