Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0419 ATGGGAGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACCAAGGAGTGCGTTTTTGCTCCTTACTTTCCTTCTGACGATCCTCACAAGTTTGCCATCGTCCACAAGGTCTTCGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAGCTTCCGGTGCATCAAAGAGCGGATGCTGTGAGCAGTCTAGTTTACGAGGCGAATGCTAGAGTGAGGGATCCGGTGTACGGATGTGTCGGAGCTATATCGTATCTGCAAAGTCAAGTTTCACAGTTAAAAATGCAGCTTGCAGTGGCTCAAACAGAGATTATGTGCATTCAGCTGCAGCAAGATCCTACAAACTTATTATCAACTCATCAGATTGATCATTACCAAGATGAAAATAAGACGCTTATCTTGTCTGATAATAACTACGAAAGCAGCAATATTCATGATAATGTTGCTGATCATCACTATCTCAGTTTTGCTTCTTCTTCCTCATCTAGTAATGTAATCCAAGACCCTTTTAAGAGAGAGTCATTTTGGAGTTAA 540 0.4315 MGGSSPCASCKLLRRRCTKECVFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLKMQLAVAQTEIMCIQLQQDPTNLLSTHQIDHYQDENKTLILSDNNYESSNIHDNVADHHYLSFASSSSSSNVIQDPFKRESFWS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0419 179 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lele27g0419 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 135 - -
Lele27g0419 179 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0419 Lele-ChrLele27 3982397 3983562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0419 3 179 AS2 family AT2G30130 65.789 1.93e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele27g0419 LOB 1.2e-42 No_clan