Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0409 ATGTTCGATAAGAAATCTCATTTCAATCGGAAACCGTCGTTGCAAATCACGCTGACCAGAAAAACCGAGTGGATCCAATTTGGAAATCAGGATCAACAAGAGGAGGTTTCAGAAATGTTTGTGCTGGATAATTCAAACCATGAAGAGGAGAAAAAGCACTTCAGAGGGGTCCGACAGAGACCGTGGGGCAAGTTCGCAGCCGAGATTGGGGACCCGAACAAACGTGGATCTAGGTTGTGGCTCGGAACGTTCAACACAGCGATTGAAGCCGCAAAAGCCTACGATCGAGCTGCGTTTAGGCTTCGCAGCTCCAAAGCCATACTGAATTTTCCTCTGGAAGCAGGGACCTCGGGTTTGACGGACGGCACGGAGGAGAAAAAACGCCGGCGGGAAGATGATGAGGTGGAGGCTGAAATGGAAGTGAAAAAACCAATGGTGAAGAAAGAGAAGACAGCGGAATCTGACGTGGGAGGGATAAGGGATATGCCGTTAACGCCGTCAATGTGGACGGGGTTCTGGGGGCATGATTTGAAGGACATTTTCGCAGTTCCGCCGTTATCACCTTTATCTCCTCACCTGCCTTTGGGCTGTACACAGCTTATGGTTGTATGA 612 0.4967 MFDKKSHFNRKPSLQITLTRKTEWIQFGNQDQQEEVSEMFVLDNSNHEEEKKHFRGVRQRPWGKFAAEIGDPNKRGSRLWLGTFNTAIEAAKAYDRAAFRLRSSKAILNFPLEAGTSGLTDGTEEKKRRREDDEVEAEMEVKKPMVKKEKTAESDVGGIRDMPLTPSMWTGFWGHDLKDIFAVPPLSPLSPHLPLGCTQLMVV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0409 203 FunFam Ethylene-responsive transcription factor 2 52 113 - -
Lele27g0409 203 ProSiteProfiles AP2/ERF domain profile. 53 111 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 SUPERFAMILY DNA-binding domain 53 113 IPR016177 GO:0003677
Lele27g0409 203 MobiDBLite consensus disorder prediction 120 138 - -
Lele27g0409 203 PANTHER DNA-BINDING DOMAIN 37 132 IPR044808 GO:0003700|GO:0009873
Lele27g0409 203 MobiDBLite consensus disorder prediction 114 138 - -
Lele27g0409 203 SMART rav1_2 53 117 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 CDD AP2 52 111 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Lele27g0409 203 Gene3D AP2/ERF domain 52 113 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0409 Lele-ChrLele27 3786519 3787130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0409 10 203 AP2-EREBP Transcription Factor Family AT5G47230 55.670 2.24e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele27g0409 AP2 3.5e-14 CL0081