Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0408 ATGGTACTACTCAATTCCCATGCCAACATGCAGACAACAACTTCTTCAACCTCAAATGCAATTCCTTCCATTAGCCTGCAGGGACTTATGGTTTCCACAAACTATCTTCCAGGTGAAGACTTCCTTAATGAACTCACTGAAATGGAAGACTCTCGCAGTAAAAAGCCCTTAACAGACTCTGAAATGGAAGACAAGTGTGGAAGAAGCATCACAAAGCAATTACCAGGACCCATGAAACCTAACTTATTATTACCACCATCATCTGCCTCATCATCATCAAAGCCTCCTTTGGGACCAGTTCCTTTACTCCTAAAAAACCCTAATAACTCTCCTTCTCTAGTTATTCCTGCCATTGAAGCTCTTACTGTTAACTCTGAGCAAGCTGACAAGAATGAACAGTGCCAAACACCTGAGTCTTCTGCTCACAAGAACAATGTCGAAACTTCTGATGCCAGGAAGCTCAAGCGAGTGATGTCAAATCGTATGTCTGCTTATAGATCAAGATTGATGAAGCTTGAACATGTGGCTAATTTGGAGAGGCAATGCGCACAATTGCAGAATCAGATAAGTCATCTTCATCCTCAAATCGAAGCATTTGCCAATCTTAAGAACATGTTGATGTTGGAGCAAAATGTCTTGACGCAAAGAGTTCAAGCTCTGCAGAATCAAACATACGTTAAACAAGGAGAAGAGCTTGAGAGTTTGAATTTATTTGCAGCTGAAATTGGAATGAACAAAGCAGAAGTGTATGAGCTGAGGGAAATAGAGAAGCGACAAAAAGAGGCTGAAGCTCAAGCAATGATGGCTTTCGCGAATTGGGACACTCTTCCCAATGATAATAATCCACAAATAGTTCTTAATGCAAATATTCCAGCTCAAGGTTTTCAAAACATAGAAGGAATTTCCGGAAATGAAGTGGATGAGGAGACAATGAACATGAACATTTCTGCCTCAATGAATGAGTTAGACGCCATTGTTAACCCTCCAAAGCTCAATGACAATGAGGCTAACTCAGAGTTTGACTTTTATTTTTAA 1035 0.4029 MVLLNSHANMQTTTSSTSNAIPSISLQGLMVSTNYLPGEDFLNELTEMEDSRSKKPLTDSEMEDKCGRSITKQLPGPMKPNLLLPPSSASSSSKPPLGPVPLLLKNPNNSPSLVIPAIEALTVNSEQADKNEQCQTPESSAHKNNVETSDARKLKRVMSNRMSAYRSRLMKLEHVANLERQCAQLQNQISHLHPQIEAFANLKNMLMLEQNVLTQRVQALQNQTYVKQGEELESLNLFAAEIGMNKAEVYELREIEKRQKEAEAQAMMAFANWDTLPNDNNPQIVLNANIPAQGFQNIEGISGNEVDEETMNMNISASMNELDAIVNPPKLNDNEANSEFDFYF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0408 344 Pfam bZIP transcription factor 151 201 IPR004827 GO:0003700|GO:0006355
Lele27g0408 344 Gene3D - 151 207 - -
Lele27g0408 344 PANTHER BASIC LEUCINE ZIPPER 34 110 273 - -
Lele27g0408 344 MobiDBLite consensus disorder prediction 48 68 - -
Lele27g0408 344 SMART brlzneu 148 212 IPR004827 GO:0003700|GO:0006355
Lele27g0408 344 MobiDBLite consensus disorder prediction 48 98 - -
Lele27g0408 344 Coils Coil 168 188 - -
Lele27g0408 344 MobiDBLite consensus disorder prediction 127 144 - -
Lele27g0408 344 CDD bZIP_plant_RF2 153 204 IPR044759 GO:0003700|GO:0006355
Lele27g0408 344 MobiDBLite consensus disorder prediction 127 149 - -
Lele27g0408 344 SUPERFAMILY Leucine zipper domain 152 206 IPR046347 GO:0003700|GO:0006355
Lele27g0408 344 Coils Coil 245 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0408 Lele-ChrLele27 3779876 3784479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0408 133 232 bZIP Transcription Factor Family AT3G58120 33.333 6.72e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele27g0408 bZIP_1 1.3e-08 CL0018