Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0405 ATGGGTCTCGGTGGTTGCGTCGCTCAGGCGGGTTTTAGCTTTGGAACCACGGCTTATATGTGCTTCATGTTCTCGGTGACGACACCGATGGGGATTATATTGGGGATGATGTTATTTTCAGTAACAGGTTATGATGATAGTAATCCAAAAGCTTTGATCATGGAAGGCTTGTTAGGTTCAATTTCTGCTGGGATTCTGATATATATGGCTCTGGTTGACCTAATTGCAATAGATTTCTTTCACAGTAAGCTTATGAGCTCCAATTTGACATTGAAGAAGGTTTCTTTTGTTGCCTTGACTCTTGGCTCTACTGCCATGTCAATTCTGGCCCTGTGGGCTTGA 342 0.4327 MGLGGCVAQAGFSFGTTAYMCFMFSVTTPMGIILGMMLFSVTGYDDSNPKALIMEGLLGSISAGILIYMALVDLIAIDFFHSKLMSSNLTLKKVSFVALTLGSTAMSILALWA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0405 113 PANTHER ZINC/IRON TRANSPORTER 1 106 - -
Lele27g0405 113 Pfam ZIP Zinc transporter 1 110 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0405 Lele-ChrLele27 3733964 3735780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0405 1 113 Inorganic Solute Cotransporters AT2G30080 69.231 2.55e-53 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1683 25 24467630 24469543 Lele27g0405 27 3733964 3735780 hybridization
Lele26g1683 26 20309097 20311094 Lele27g0405 27 3733964 3735780 hybridization