Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0401 ATGTCGTGCTCCGTGGCTCTCTCTAACTCTCCGGTCTTCTCTCCGTCGGCTTCTCTCTTCTGCAACAAGCCCTCCGTCGTCATCTCTTCCTCGCCGGAATCCCTTTCTCTCTCTTTGTCCCACCTTAAGCCTTCCGCTTCTGCTGCTTCTTCTTCTTCTTCGCCTTCTTCCCCTTCCTCGCCTTTCCGCCTCCGCGTCCTCAAGCCTCCTCCTCCTACCGCCCTTTCCAATTCCGCCTGCGCCTCCGCTCCTTCCTCCTCCACCTCGCCAAACGGTACAGTTTTGAAGAGGAAGAGGCCCGCAAGGCTTGATATTCCCGTTGTCTCATCTCTCACTTTTGGGGTTCCGGCGACGCCGTCTGCTTCGGTGGCTGGAGATGTTCTAGAGGCTGAAGGGCTTGGGTTTTCTGTGTATTGTAAGAGAGGAAGGCGAGAGTACATGGAAGATCGTTATTCTGCTTCCGTCAATCTTCAAGGGCAACCCAAACAGGCTTTCTTTGGCATATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCTGCACATAACTTAGAAAAGAACGTCATGGATGAAGTAACAAGAAGAGATGAAGATGACATAGAGGAGGCAGTGAAACATGGTTACCTGAACACTGATTCTGATTTCTTAAAAGAGGATCTTCATGGTGGCTCCTGCTGTGTAACAGCACTGATTAAGAACGGAAACCTTGTTGTTTCTAACGCCGGTGATTGCCGTGCTGTTATTAGCCGAGGTGGAGTTGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACCACAGGTGGCTATGTTGATTTATGCCGTGGGGTTTGGAGGATCCAAGGATCTCTAGCAGTTTCTAGAGGAATTGGAGATAGATATTTGAAGCAATGGGTTATAGCTGAACCTGAGACTAAAGTTCTTAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGACAAGGTTAGTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCAATGGGGGTAGTAGTAATACAGCAAAACCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCAAGAGGCTCAAGTGATGACATAAGTATTATGCTAGTAAAACCGGGACACTTTATGTAA 1176 0.4753 MSCSVALSNSPVFSPSASLFCNKPSVVISSSPESLSLSLSHLKPSASAASSSSSPSSPSSPFRLRVLKPPPPTALSNSACASAPSSSTSPNGTVLKRKRPARLDIPVVSSLTFGVPATPSASVAGDVLEAEGLGFSVYCKRGRREYMEDRYSASVNLQGQPKQAFFGIFDGHGGSKAAEFAAHNLEKNVMDEVTRRDEDDIEEAVKHGYLNTDSDFLKEDLHGGSCCVTALIKNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETTGGYVDLCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARPLCNGGSSNTAKPLMACKKLVDLSVSRGSSDDISIMLVKPGHFM 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0401 391 MobiDBLite consensus disorder prediction 45 61 - -
Lele27g0401 391 Gene3D - 132 389 IPR036457 -
Lele27g0401 391 SUPERFAMILY PP2C-like 132 386 IPR036457 -
Lele27g0401 391 ProSiteProfiles PPM-type phosphatase domain profile. 134 387 IPR001932 -
Lele27g0401 391 MobiDBLite consensus disorder prediction 45 98 - -
Lele27g0401 391 FunFam probable protein phosphatase 2C 25 127 390 - -
Lele27g0401 391 Pfam Protein phosphatase 2C 135 380 IPR001932 -
Lele27g0401 391 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169
Lele27g0401 391 CDD PP2Cc 134 385 IPR001932 -
Lele27g0401 391 PANTHER PROTEIN PHOSPHATASE 2C 65 385 IPR015655 GO:0004722|GO:0006470
Lele27g0401 391 SMART PP2C_4 124 385 IPR001932 -
Lele27g0401 391 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele27g0401 Lele-ChrLele27 3673771 3675557 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0401 1 391 PP2C-type Phosphatase Gene Family AT2G30020 66.915 4.61e-173 486