Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0400 ATGTGTGGAATTCTCGCTGTGCTTGGTTGTACCGACGACTCCCAGGCCAAGAGAGTCCGCGTCCTCGAACTCTCTCGAAGGCAATTACTCATTCATTCATTCATTCATTCTCTATTGGTTCTTGTCTTTGATTTTGTTTACTTGTTTTGGTGTCACAGATTGAGGCATCGTGGTCCTGATTGGAGTGGTCTTCACCAACATGGTGATTGTTACTTGGCTCATCAACGGCTGGCCATAATTGATCCTGCTTCTGGTGATCAACCTCTCTTTAATGAAGACAAATCCGTCGTGGTCACGGTGAATGGAGAGATATACAACCATGAAGAGCTGAGGAAACAACTGTCCAACCACAAGTTCAGGACAGAAAGTGACTGTGATGTTATTGCACATTTGTATGAGGAATATGGAGAAAATTTTGTGGACATGCTGGACGGCATCTTTTCATTTGTTCTTCTGGACACCCGAGACAACAGCTTCATTGTTGCAAGAGATGCTATTGGTGTCACTTCCCTTTACATTGGCTGGGGGCTAGATGGCTCTATTTGGATTTCATCTGAGCTCAAAGGGCTCAATGATGATTGTGAGCATTTCGAGTGGTTCCCTCCGGGCCACTTGTACTCAAGCAAAGAAGGAAGCTTCCGTAGGTGGTACAATCCTCCATGGTTCTCTGAGGTCGTTCCATCAACCCCTTATGATCCCTTAGCTCTGAGGCATGCTTTTGAGAAGGCAGTCATAAAAAGGCTTATGACAGATGTGCCTTTCGGTGTTTTACTGTCTGGAGGTTTGGACTCATCCTTGGTTGCATCCATCACCGCTCGCTACCTCGCTGATACAAAAGCTGCCAAACAGTGGGGACCAAAACTACACTCCTTCTGTGTAGGCCTTGAGGGCTCACCAGATCTGAAGGCTGCAAAAGAAGTTGCAGAGTACATAGGGACTGTTCACCATGAATTTCACTTCACTGTCCAGGATGGCATAGATGCCATTGAAGATGTAATCTATCATATAGAAACATATGATGTGACTACAATCAGAGCTAGTACCCCTATGTTCCTCATGTCACGCAAGATTAAATCGCTCGGAGTGAAAATGGTTATCTCTGGAGAGGGATCCGATGAAATTTTTGGCGGATATCTGTACTTCCACAAGGCCCCTAACAAGAAGGAGTTCCATGAAGAAACTTGCCGCAAGATTAAGGCACTTCATCAGTATGATTGCTTGAGAGCCAATAAAGCAACATCTGCTTGGGGTCTGGAAGCTAGAGTCCCGTTTCTGGACAAGGAGTTTATCAATGTTGCAATGAACATTGATCCTGAGTTTAAAATGATTAAACGAGATGAAGGCCGGATTGAGAAGTGGGTTCTTAGGAGAGCCTTTGATGATGAAGAGCATCCTTATCTTCCAAAGCACATTTTATACAGACAGAAAGAACAATTCAGTGATGGAGTTGGCTATAGTTGGATTGATGGCCTTAAAGCCCATGCTGCAAAACATGTGAGTGACAAAATGATGTTCAATGCTGCTAACATCTTCCCCCACAACACTCCAACCACCAAAGAGGCATATTATTACAGAATGATCTTTGAGAGGTTCTTCCCACAGAACTCTGCAAGGCTTACTGTTCCGGGAGGCGCGAGTGTTGCTTGCAGCACCGCGAAAGCAGTGGAGTGGGACGCAGCCTGGTCTAACAATCTGGATCCTTCTGGCAGAGCAGCACTTGGAGTGCATGCTTCTGCATATGACAACCAAAACAAAGCTGTAGAGCCAGAGAAGATCATCCCCAAGATGGAAATTCCTTTTGGAGTAGCAATTCAGAGCTAA 1821 0.4519 MCGILAVLGCTDDSQAKRVRVLELSRRQLLIHSFIHSLLVLVFDFVYLFWCHRLRHRGPDWSGLHQHGDCYLAHQRLAIIDPASGDQPLFNEDKSVVVTVNGEIYNHEELRKQLSNHKFRTESDCDVIAHLYEEYGENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSIWISSELKGLNDDCEHFEWFPPGHLYSSKEGSFRRWYNPPWFSEVVPSTPYDPLALRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITARYLADTKAAKQWGPKLHSFCVGLEGSPDLKAAKEVAEYIGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMNIDPEFKMIKRDEGRIEKWVLRRAFDDEEHPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVSDKMMFNAANIFPHNTPTTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDAAWSNNLDPSGRAALGVHASAYDNQNKAVEPEKIIPKMEIPFGVAIQS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0400 606 CDD AsnB 53 218 IPR033738 -
Lele27g0400 606 Gene3D HUPs 222 539 IPR014729 -
Lele27g0400 606 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 211 IPR017932 -
Lele27g0400 606 CDD Asn_Synthase_B_C 237 482 IPR001962 GO:0004066|GO:0006529
Lele27g0400 606 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 226 505 - -
Lele27g0400 606 PANTHER ASPARAGINE SYNTHETASE 1 580 - -
Lele27g0400 606 PIRSF Asn_synthetase_glu-h 383 543 IPR006426 GO:0004066|GO:0006529
Lele27g0400 606 PIRSF Asn_synthetase_glu-h 1 30 IPR006426 GO:0004066|GO:0006529
Lele27g0400 606 PIRSF Asn_synthetase_glu-h 50 386 IPR006426 GO:0004066|GO:0006529
Lele27g0400 606 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 49 218 IPR029055 -
Lele27g0400 606 Pfam Asparagine synthase 236 387 IPR001962 GO:0004066|GO:0006529
Lele27g0400 606 Pfam Glutamine amidotransferase domain 74 191 IPR017932 -
Lele27g0400 606 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 221 IPR029055 -
Lele27g0400 606 FunFam Asparagine synthetase [glutamine-hydrolyzing] 221 540 - -
Lele27g0400 606 FunFam Asparagine synthetase [glutamine-hydrolyzing] 45 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0400 Lele-ChrLele27 3629132 3633399 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1219 01 7353530 7358347 Lele27g0400 27 3629132 3633399 CCT
Lele02g1489 02 19089372 19094181 Lele27g0400 27 3629132 3633399 CCT
Lele03g1232 03 7316094 7320925 Lele27g0400 27 3629132 3633399 CCT
Lele04g1474 04 19938523 19943327 Lele27g0400 27 3629132 3633399 CCT
Lele25g1689 25 24569210 24573396 Lele27g0400 27 3629132 3633399 hybridization
Lele26g1689 26 20424285 20428780 Lele27g0400 27 3629132 3633399 hybridization