Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0396 ATGGCTTGGTTAAGAAATCTTTCCAGATTTTCCGCCATTAACGTATCTCGGAGACAACACCCATTTCTTCTATCTTCTTTCAATTTTCTCAGTTCCAACGGTACCCCTAATCCCACTGTTGAAAAACCGTCGGTTGATCCGGTTCAGTATTCGGGTTTGGGACCTACGAAGCCCCATGAGAAGCCGCGAGTGGTAGTGCTGGGTTCTGGGTGGGCTGGATGCAGGCTCATGAAGGGGTTGGACCCTGAAATCTATGACATTGTTTGCGTCTCACCTCGCAATCATATGGTCTTTACGCCTCTGTTGGCTTCCACATGTGTTGGAACTCTGGAATTTAGATCTGTTGCTGAACCCATTGCCAGGATCCAACCCGCCATTTCTAGGGAGCCTGGTTCTTATTTTTTCCTTTCCAATTGTACTGGAATTAGTGCAGATAAGCATATGGTTCATTGTGAGACTGTAACTGATGGTGAACAAGCGCTAGATCCTTGGAGTTTTACGGTCTCATATGATAAGCTTGTAATTGCATTAGGAGCACAGCCCACCACTTTTGGAATTCATGGAGTCAAAGAACATGCAATTTTTCTTCGTGAAGTTCACCATGCTCAGGAAATTCGCAGGAAGTTGCTTCTTAATTTGATGTTGTCTGATGTGCCAGGCATTTCAGAAGAGGAAAAGAAAAGGCTTTTGCACTGTGTGGTTGTGGGAGGTGGTCCAACTGGAGTTGAATTCAGTGGTGAACTTAGTGATTTTATCATGAGAGATGTCCGTCAAAGATATGCCCATGTGAAGGATTACATCCATGTTACTTTAATTGAGGCAAACGAGATATTGTCTTCCTTTGATGTCCGTCTCAGGAATTATGCTACCAAGCAGTTGACAAAGTCAGGAGTCCGTCTTGTTCGTGGTACTGTGAAAGATGTTCAAGATCAGAATATTATCCTTAATGATGGCACTGAGGTTCCATATGGTTTGCTGGTATGGTCAACTGGTGTTGGTCCATCACCTTTTGTTCATGCTTTAGATCTTCCCAAAGCTCCTGGTGGAGGAAGGATTGGAGTTGACGAGTGGCTTCGTGTTCCTTCAGTACAAGACATTTTCTCAATAGGCGACTGCAGTGGATTTGTTGAAAGTACAGGAAGACAAACACTTCCAGCCTTGGCCCAAGTGGCAGAGAGGCAAGGGAAATACTTAGCAAACCTGCTAAACAAAATTGGGAAAGCAGGAGGAGGCGGAGCAAACAGTGGAAAAGACATTGATTTAGGAGAACCATTTGTCTACAAGCACCTTGGAAGCATGGCATCTGTTGGCAGCTACAAGGCTCTTGTGGACCTTAGACAGAGCAAGGAGGCAAAAGGTATATCACTGGCAGGATTTATCAGTTGGTTCATTTGGCGATCAGCATATCTAACACGTGTGGTGAGCTGGCGAAACAGATTCTATGTGGCAATCAACTGGGCTACAACTTTACTATTTGGTCGTGATATCAGCAGGATATGA 1500 0.446 MAWLRNLSRFSAINVSRRQHPFLLSSFNFLSSNGTPNPTVEKPSVDPVQYSGLGPTKPHEKPRVVVLGSGWAGCRLMKGLDPEIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSNCTGISADKHMVHCETVTDGEQALDPWSFTVSYDKLVIALGAQPTTFGIHGVKEHAIFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYAHVKDYIHVTLIEANEILSSFDVRLRNYATKQLTKSGVRLVRGTVKDVQDQNIILNDGTEVPYGLLVWSTGVGPSPFVHALDLPKAPGGGRIGVDEWLRVPSVQDIFSIGDCSGFVESTGRQTLPALAQVAERQGKYLANLLNKIGKAGGGGANSGKDIDLGEPFVYKHLGSMASVGSYKALVDLRQSKEAKGISLAGFISWFIWRSAYLTRVVSWRNRFYVAINWATTLLFGRDISRI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0396 499 Gene3D - 55 499 - -
Lele27g0396 499 FunFam Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial 53 498 - -
Lele27g0396 499 Pfam Pyridine nucleotide-disulphide oxidoreductase 63 395 IPR023753 GO:0016491
Lele27g0396 499 PRINTS FAD-dependent pyridine nucleotide reductase signature 170 188 - -
Lele27g0396 499 PRINTS FAD-dependent pyridine nucleotide reductase signature 64 83 - -
Lele27g0396 499 PRINTS FAD-dependent pyridine nucleotide reductase signature 231 249 - -
Lele27g0396 499 PANTHER NADH DEHYDROGENASE 50 499 IPR045024 GO:0003954|GO:0006116
Lele27g0396 499 SUPERFAMILY FAD/NAD(P)-binding domain 54 403 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0396 Lele-ChrLele27 3572925 3582878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0396 64 390 EF-hand Containing Proteins AT4G28220 38.393 2.23e-71 234
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0396 27 3572925 3582878 Lele01g1230 01 7438365 7441075 CCT
Lele27g0396 27 3572925 3582878 Lele02g1500 02 19159533 19162202 CCT
Lele27g0396 27 3572925 3582878 Lele03g1242 03 7400510 7404376 CCT
Lele27g0396 27 3572925 3582878 Lele04g1484 04 20012874 20015629 CCT
Lele25g1692 25 24604647 24611650 Lele27g0396 27 3572925 3582878 hybridization
Lele26g1694 26 20471041 20475198 Lele27g0396 27 3572925 3582878 hybridization