Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0373 ATGAAGTGGGAAATGGATATTCTCTCATCATCTTCTCATATGTCCAATCCAACTTGGCTCATTCAAGACTCCATGATGAACACAACAACAACAACAACAAAATGGACTGCTTCAGAGAACAAGTTGTTTGAGAATGCTCTTGCAGTGTATGATAAAGACACACCAGATCGGTGGGTGAAAGTTGCAGCAATGATACCAGGGAAGACAGTAGGAGATGTGATTAAGCAGTACAGAGAGTTAGAAGAAGATGTTATTAATATAGAAGCTGGATTGATCCCAATTCGAGGTTATAATAATAGTAGTAGTAGCACCACCACCACAACAACCTCTCAGCAATTCACCTTAGATTGGGTTAACTCTTCTGGATTTGATTCCTTCAAATCTCATGGTGGAAAAAGATCCTCATCTTCAGGAAGACTCCCTGAACAAGAAAGAAAGAAAGGTGTTCCATGGACAGAAGAAGAACACAAACTGTTTCTTCTGGGGTTGAACAAGTATGGGAAAGGAGATTGGAGAAACATATCGCGGAATTTCGTGGTGACTCGGACGCCGACTCAGGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCAGGAGGGAAAGACAAGAGAAGAGCAAGCATTCATGATATAACAACCGTGAATCTGTCAGAAACCGCAGGAACACCTTCTTCTTCTTCCTCTTTAGAAGACAACAACAACAACAACAAAAAGCGGGAGGCAAATCCATCAAGTGCTATTTTAGGTCATCAAGCACATTTTCAATGGAACCAGCAGGCAAATGCAGGAGCAATGGGGTTTAATCCTTATGGGGTTAACTCTTATGGGATAAAAGTGCAGGGCCAAAATAGTAATCTGCATAGAAGTGCTCTTCTTAATAATCATGATTCTTCTTCTTCTTACTTTGGATCACCTCAAACTCATCAGAACATGGCTTTCCAAATGCATTCTTCTTCTGCTCACCACTTTTCTCATGCTTTATAG 990 0.4101 MKWEMDILSSSSHMSNPTWLIQDSMMNTTTTTTKWTASENKLFENALAVYDKDTPDRWVKVAAMIPGKTVGDVIKQYRELEEDVINIEAGLIPIRGYNNSSSSTTTTTTSQQFTLDWVNSSGFDSFKSHGGKRSSSSGRLPEQERKKGVPWTEEEHKLFLLGLNKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSETAGTPSSSSSLEDNNNNNKKREANPSSAILGHQAHFQWNQQANAGAMGFNPYGVNSYGIKVQGQNSNLHRSALLNNHDSSSSYFGSPQTHQNMAFQMHSSSAHHFSHAL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0373 329 ProSiteProfiles SANT domain profile. 151 199 IPR017884 -
Lele27g0373 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 199 IPR017930 -
Lele27g0373 329 ProSiteProfiles SANT domain profile. 30 84 IPR017884 -
Lele27g0373 329 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 29 289 IPR043363 -
Lele27g0373 329 Gene3D - 27 94 - -
Lele27g0373 329 MobiDBLite consensus disorder prediction 128 149 - -
Lele27g0373 329 CDD SANT 150 195 IPR001005 -
Lele27g0373 329 Gene3D - 149 199 - -
Lele27g0373 329 SMART sant 31 83 IPR001005 -
Lele27g0373 329 SMART sant 147 197 IPR001005 -
Lele27g0373 329 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Lele27g0373 329 FunFam Transcription factor SRM1 27 94 - -
Lele27g0373 329 ProSiteProfiles Myb-like domain profile. 143 195 IPR001005 -
Lele27g0373 329 Pfam Myb-like DNA-binding domain 150 195 IPR001005 -
Lele27g0373 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 146 198 IPR006447 GO:0003677
Lele27g0373 329 CDD SANT 34 80 IPR001005 -
Lele27g0373 329 FunFam transcription factor MYB1R1 149 200 - -
Lele27g0373 329 MobiDBLite consensus disorder prediction 218 244 - -
Lele27g0373 329 SUPERFAMILY Homeodomain-like 144 198 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0373 Lele-ChrLele27 3317325 3318494 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0373 Myb_DNA-binding 2.4e-12 CL0123