Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0369 ATGGATTGCGACGGTAATGATTATTGCTTCAGCGGCGGGGAGGAGAAGGACGAGGCCTTGTACTGCGACGATGGAAATGACGAGGATGATTACGATTTCATCGACAATGCTTCTGATAATTCTGATGTTGCTCCCTCGAATCGTCACCAGGTGCAAAACTATACAGTCTTGAGTGAAAGCGACATTCGTCAACGGCAAGAGGATGAGATTATGAAGATATCCACTGTGCTATCCATTTCAAAGGTTGCAGCTTGTATACTGCTTCGTCACTATAATTGGAATGTTAGTAAAGTACATGATGAATGGTTTGCAGATGAAGAAAAAGTTCGCAGTGCAGTTGGCTTGTTGGAGAAACCTTTTGTGGAATATAAAGATTCTAGTGAGATGACTTGTGGAATCTGTTTTGATACATATCCAGGTGTTGATATGCTTGATGCTGGTTGCGGTCATCCCTTTTGTAGATCATGTTGGGAAGGTTATATCAGTGTAGCCATCAGTAACGGTCTTGGATGTTTATCATTGCGGTGTCCTGATCCATCATGTGGCGCTGCTGTTGGTGAAGATTTTATCAATTTATTGGCTTCTGATGAAGAGAAGGAGAAGTACTCTGCTTATTTTATCAGGTCTTATATTGAGGACAACAAAAAGACAAAATGGTGCCCTGCTCCTGGATGTGATTTTGCTGTGGACTTTGCTTCCGGTAGTGGAAGCTACGATGTTACATGCAAGTGCTCATGTAGTTTTTGCTGGAATTGCACTGAAGAAGCACATAGGCCTGTTGATTGTGATACTGTCGCCAAATGGATATTGAAGAATAGTGCTGAATCTGAAAATATGAATTGGATATTGGCCAATTCAAAACCTTGTCCAAGCTGCAAACGGCCAATTGAGAAAAACCAAGGTTGTATGCATATGACTTGCACACCTCCCTGCAAGTATGAGTTTTGCTGGCTTTGCCTTGGTCCATGGTTAGAGCATGGTGAGACAACAGGTGGTTTTTATGCATGTAATCGTTATGAAGAAGCAAAGGCAGATAAAGAGTTTCAAGAGGCGGAACAACAAAGAGAGATAATCAAGAACTCTCTTGAAAGATATTATCACTATTATGAAAGATGGGCAACCAATCAATCATCCAGACAGAAAGCTCTTGCAGACCTAGAGCAAATGCAAACTGTGCACAGCTATGCTAATGATCATCTATTGTTGCAGCTTGAGAAGCTCAGTGACTTGCAGTGTCAGCCTGAATCACAGCTAAAATTCATCACAGAGGCCTGGTTACAGATCGTTGAATGCAGACGTGTTTTGAAATGGACATACGCCTATGGCTACTATATACCTGAGAAGGAGAAGGCTAAGAGAGAGTTTTTTGAATACTTGCAAGGTGAAGCTGAGGCTGGATTGGAACGACTTCATCAGTGTGCTGAGAAGGAACTGGAGATATATCTCACTGAAAAGAATCCAGAAAGATATTTTAACAGTTTCCGCACTAAACTTTCTGGACTAACCAGTGTGACACGGACCTTCTTTGAGAATCTAGTAAAAGCTTTGGAGAATGGTTTATCAGATGTGAACTCTCATGTTTCAACCAGCAGAAATGCAAGCTTAAAGAGCTTGGGAAGAAGTTGTAGTGGGAAAAAGGGGAGGGAGGAGCCTGTAACACCCAGATCAAATGATTCTGGAATTGTTAGATGA 1692 0.4178 MDCDGNDYCFSGGEEKDEALYCDDGNDEDDYDFIDNASDNSDVAPSNRHQVQNYTVLSESDIRQRQEDEIMKISTVLSISKVAACILLRHYNWNVSKVHDEWFADEEKVRSAVGLLEKPFVEYKDSSEMTCGICFDTYPGVDMLDAGCGHPFCRSCWEGYISVAISNGLGCLSLRCPDPSCGAAVGEDFINLLASDEEKEKYSAYFIRSYIEDNKKTKWCPAPGCDFAVDFASGSGSYDVTCKCSCSFCWNCTEEAHRPVDCDTVAKWILKNSAESENMNWILANSKPCPSCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGPWLEHGETTGGFYACNRYEEAKADKEFQEAEQQREIIKNSLERYYHYYERWATNQSSRQKALADLEQMQTVHSYANDHLLLQLEKLSDLQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYIPEKEKAKREFFEYLQGEAEAGLERLHQCAEKELEIYLTEKNPERYFNSFRTKLSGLTSVTRTFFENLVKALENGLSDVNSHVSTSRNASLKSLGRSCSGKKGREEPVTPRSNDSGIVR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0369 563 SUPERFAMILY RING/U-box 281 329 - -
Lele27g0369 563 ProSiteProfiles Zinc finger RING-type profile. 131 177 IPR001841 -
Lele27g0369 563 Coils Coil 341 361 - -
Lele27g0369 563 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 211 IPR013083 -
Lele27g0369 563 SUPERFAMILY RING/U-box 125 212 - -
Lele27g0369 563 SUPERFAMILY RING/U-box 200 269 - -
Lele27g0369 563 ProSiteProfiles TRIAD supradomain profile. 127 340 IPR044066 -
Lele27g0369 563 FunFam RBR-type E3 ubiquitin transferase 125 214 - -
Lele27g0369 563 FunFam RBR-type E3 ubiquitin transferase 263 523 - -
Lele27g0369 563 Pfam IBR domain, a half RING-finger domain 200 262 IPR002867 -
Lele27g0369 563 Pfam IBR domain, a half RING-finger domain 279 328 IPR002867 -
Lele27g0369 563 Gene3D - 258 523 - -
Lele27g0369 563 SMART ibrneu5 200 262 IPR002867 -
Lele27g0369 563 SMART ibrneu5 266 336 IPR002867 -
Lele27g0369 563 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 48 438 IPR031127 GO:0004842|GO:0016567
Lele27g0369 563 CDD RING-HC_RBR_TRIAD1_like 131 181 - -
Lele27g0369 563 MobiDBLite consensus disorder prediction 532 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0369 Lele-ChrLele27 3257502 3264359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0369 4 544 ARIADNE family AT1G65430 68.946 0.0 769