Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0350 ATGCAAACATTAAACATGGAGGGATTAATTGCGACATTGGAGTCTTATTTCGCTTATGCTTCTACTTCATCATCACATGGTCGAGAACTTTACAATTTTATTAAAAATTATATCAAAAAATATTCAAAATATTATGATGATGACGACGATGATAATGATTATTTCAATTCTTTTCCACCTGGATATCGATTCAACCCTACTGAGGAAGAACTCGTCGTCTCTTATCTCATGAAGAAAGTCAGGAACGAACCTTTGCCTCGAAATCAGATGTTAGAAGTTGATGTATATCAGCACGACCCTGAAATTGTTTGCAATAAGTATAAGAATGCTGGAGAAAATGAATGGTATTTTTTCTCACCAAGGGAAAGAAAATATCCAAATGGAGTAAGGCCAAAGAGAACAACAAGAGATGGGTATTGGAAGGTTTCAGGATCAGAAAAATTGGTATTTTCAAAGGGAAGAGCCGTTGGAAAATGGAATACGTTGGTTTATTATAGAGGGAAGGCTCCAACAGGTACAAAGACCAATTGGATTATGCGTGAGTTTAAACTTGCACAACAATCTCATAAGAGAACAAGTAATATTGACATGATGACTGAAGCCAACAAGAATAGCAAAAGCAAAAGCAAAGGAATAAAAGAGGAGGAGGCGGAAGAAGGATTTGGAAAAGCAAGTGATATTATCAAAGTACCTCAATACCTAAGAAATGGATATGATCAGTATCATCGTCACTTTGATCAATATCAGTATCAAGATTTGCAATTAAGGGATCATAATACGTTTCCTTCTTATGTGGAGGACAAAACTCAAACATTCTCAGAAATCGATGGATGCGAAGACTTATTTATGATGTTGGAGGGATTTAATAATAATGATATTGGCCCTTATTCTCTGGAGGAACTAAGCCATGATCTTAACATGGCAGTTACTACTATGGGTTCTAAGTCAAGGTCCAATAATGGTGAAGCTATCATATGTAATAATGTATAG 990 0.3545 MQTLNMEGLIATLESYFAYASTSSSHGRELYNFIKNYIKKYSKYYDDDDDDNDYFNSFPPGYRFNPTEEELVVSYLMKKVRNEPLPRNQMLEVDVYQHDPEIVCNKYKNAGENEWYFFSPRERKYPNGVRPKRTTRDGYWKVSGSEKLVFSKGRAVGKWNTLVYYRGKAPTGTKTNWIMREFKLAQQSHKRTSNIDMMTEANKNSKSKSKGIKEEEAEEGFGKASDIIKVPQYLRNGYDQYHRHFDQYQYQDLQLRDHNTFPSYVEDKTQTFSEIDGCEDLFMMLEGFNNNDIGPYSLEELSHDLNMAVTTMGSKSRSNNGEAIICNNV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0350 329 SUPERFAMILY NAC domain 55 191 IPR036093 GO:0003677|GO:0006355
Lele27g0350 329 PANTHER NAC TRANSCRIPTION FACTOR 56 58 240 - -
Lele27g0350 329 ProSiteProfiles NAC domain profile. 58 204 IPR003441 GO:0003677|GO:0006355
Lele27g0350 329 Gene3D NAC domain 67 217 IPR036093 GO:0003677|GO:0006355
Lele27g0350 329 Pfam No apical meristem (NAM) protein 59 184 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0350 Lele-ChrLele27 3055644 3058111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0350 57 193 NAC Transcription Factor Family AT3G15500 50.365 1.72e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele27g0350 NAM 1.8e-29 No_clan