Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0323 ATGGAAAAAACGCATACAGATGTAGTTGCTGGAGTTCGAAGTGATGGCGATTCGTTTTCAGATCCTGCTCATTATCATCGTCTCCAGACATGCACAGGAAATGAAAAAGGTGATAATTCCTCCTTGCTTCAGCAGTCCAGACGACCAAGCCTTACCTCTTTGCATATACCAGTAAGGTCAGTAGAAAGTGCATTATCGTCTTCTGCAAAGACAGATGTTCTACCATCGTCAAGTCTAGGTTCCGCTCGAGGAGTACTGCCTCCAAGACCAAATTCAGCCAGAGTCAAGTCTTCCATGAGAAGTTTACTTCCTCAGAGGAGTTTAAAGGCAAAAAATAGTTCTCCAGATTGTGAAAGGGAAGTTCTCATTGTTTGTGATATTCCCTCATCAGATAGAACTTCGGATGAGCCTTCAACTTCAAGGTCCCTTTCTTTTAATTGGTTCCCTTCATCAACAAAGGCATCAAATTCGTTACCAGCTATACCAATTGCAAATACAGTTGCAGAGACCATGCGTGGAAGTCATCTAGGAAGTGATCCTGACTTAAGTAAAATGGAAGTCAGGCACCACATGACTCGATCGTTTTCAGTTCCCGTTAATGTCAAATCGTCTAGTTTAAAGCGAACAGGTTCTAGTGGCTTGATCCGAGTAATTTCAGCAAGATCACATCCTGCAGCTGTTAATGACCATTCAATTGATAAAGCTTCAGTACCAGAGATTGCCATTGAAGATGCCACTGAGGACATTCCTGAAGAAGAAGCAGTTTGTAGGATTTGTTTAATGGAGCTGGGGGAAGGTGGGGATACCCTTAAGATGGAGTGCAGTTGTAGAGGAAACCTTGCGCTTGCTCACCAAGAGTGTGCAGTGAAGTGGTTTAGTATAAAAGGAAACAAGACATGTGATGTTTGCAAGCAGGAGGTCCGAAATCTTCCAGTGACTCTCTTGAAAATCCAAAGTCCTCATCCTACTGCTGGACGGTCATCAAATACCCTGCAGGAGACAGAAGTTTCTTTTCACAGGATCTGGCAGGATGTACCAGTACTTGTCTTGGTCAGCATGCTAGCTTATTTTTGCTTTTTAGAGCAACTTCTGGTTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCACTACCTTTTGCCTGCACGTTTGGCCTTGTTGCATCTTTGCTTGCTTCAACCATGGTGAGCAGGGATTACATGTGGGCTTATGCTTGCTTCCAGTTTGCAATTGTCATACTGCTGGCTCATGTATTTTACACTATACGTAAAGTAAATGGGGTTCTCTCAGTTATGCTTTCTTCACTTGCTGGATTTGGGATTGCAATGACCGTAAATTATCTGCTCAAGGAACTTTTAAGTTGGAGATTAAGAAGGCAGATTCAATCTGTCAATCAGACCCCAACAGAGCAGGAACACGGACAGCATAATAGGCGGCAAGGGCAATCAATAACAGTACCTCCGGTAAATAGTTGA 1473 0.4338 MEKTHTDVVAGVRSDGDSFSDPAHYHRLQTCTGNEKGDNSSLLQQSRRPSLTSLHIPVRSVESALSSSAKTDVLPSSSLGSARGVLPPRPNSARVKSSMRSLLPQRSLKAKNSSPDCEREVLIVCDIPSSDRTSDEPSTSRSLSFNWFPSSTKASNSLPAIPIANTVAETMRGSHLGSDPDLSKMEVRHHMTRSFSVPVNVKSSSLKRTGSSGLIRVISARSHPAAVNDHSIDKASVPEIAIEDATEDIPEEEAVCRICLMELGEGGDTLKMECSCRGNLALAHQECAVKWFSIKGNKTCDVCKQEVRNLPVTLLKIQSPHPTAGRSSNTLQETEVSFHRIWQDVPVLVLVSMLAYFCFLEQLLVSDMGPRALAISLPFACTFGLVASLLASTMVSRDYMWAYACFQFAIVILLAHVFYTIRKVNGVLSVMLSSLAGFGIAMTVNYLLKELLSWRLRRQIQSVNQTPTEQEHGQHNRRQGQSITVPPVNS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0323 490 MobiDBLite consensus disorder prediction 465 490 - -
Lele27g0323 490 MobiDBLite consensus disorder prediction 94 111 - -
Lele27g0323 490 CDD RING_CH-C4HC3_MARCH 256 304 - -
Lele27g0323 490 MobiDBLite consensus disorder prediction 32 78 - -
Lele27g0323 490 MobiDBLite consensus disorder prediction 1 114 - -
Lele27g0323 490 SMART ringv_2 255 304 IPR011016 GO:0008270
Lele27g0323 490 PANTHER OS02G0165000 PROTEIN 34 472 - -
Lele27g0323 490 ProSiteProfiles Zinc finger RING-CH-type profile. 248 310 IPR011016 GO:0008270
Lele27g0323 490 Pfam RING-variant domain 256 303 IPR011016 GO:0008270
Lele27g0323 490 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 241 311 IPR013083 -
Lele27g0323 490 SUPERFAMILY RING/U-box 252 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0323 Lele-ChrLele27 2773431 2781277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0323 239 310 C3H Transcription Factor Family AT2G37950 45.205 1.42e-13 67.8