Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0313 ATGCATATAAACCAGGTAGGGTTTTTATCATCGAGCGAGGAGGCAAAGGGGGAAGGAGGACTCGTAGTCGCCGGAGGCAGAAAATTCCTGAAAATGGTGAAGTTCTTGAAGCAGAACAAGGCCGTTATTGTCCTTCAGGGACGCTATGCTGGTCGCAAAGCGGTGATCGTACGTACCTTCGACGACGGCACACGTGACCGCGCGTACGGCCACTGTTTGGTCGCCGGAATCAAGAAGTACCCCAGCAAGGTCATCAGGAAGGATTCCGCCAAGAAGACGGCAAAGAAATCTAGGGTTAAGGCTTTCGTCAAGCTCGTGAACTACCAGCATCTCATGCCCACTCGATACACTCTCGATGTGGATCTCAAGGATGTAGTGACCATCGATGCCCTTCAATCTAAGGACAAGAAGGTTACCGCCTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGTCTTGTTGCAGGTGTTGTTACAAAGGACTTCCTAAGATATTGGAGCAGCCCTGATGTTATGGTTAGATTTCCCTTGATTGATCACAATATGCTTTAA 591 0.4907 MHINQVGFLSSSEEAKGEGGLVVAGGRKFLKMVKFLKQNKAVIVLQGRYAGRKAVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLSLVAGVVTKDFLRYWSSPDVMVRFPLIDHNML 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0313 196 Coils Coil 131 151 - -
Lele27g0313 196 Gene3D - 32 166 IPR038655 -
Lele27g0313 196 CDD KOW_RPL27 37 119 IPR041991 -
Lele27g0313 196 SUPERFAMILY Translation proteins SH3-like domain 34 164 IPR008991 -
Lele27g0313 196 Pfam Ribosomal L27e protein family 83 165 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele27g0313 196 PANTHER 60S RIBOSOMAL PROTEIN L27 32 165 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele27g0313 196 FunFam 60S ribosomal protein L27 32 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0313 Lele-ChrLele27 2663388 2664903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0313 32 164 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 86.466 3.74e-83 241