Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0310 ATGACGTCGATCCTGATGAAGTTTGGGATAATTTTCTCTGTTCTTTTGCTTCTGTTTTCTCCGTCGCAATCTGCAGTTTTTAGCGTAGATCTAGGGTCTGAGTGGGTCAAAGTAGCGGTTGTAAATCTGAAACCTGGGCAGAGTCCAATATCGGTGGCAATCAATGAGATGTCGAAGAGGAAATCTCCGGCCTTGGTGTCATTTAATTCGGGTGATCGTCTACTCGCAGAAGAAGCAGCCGGTCTGGTGGCTCGGTATCCTCAAAACGTCTATTCCCAGATCAGGGACTTGATTGGCAAACCGTATAATTTCTCTAAGAAGTTTTTGGATTCAATGTACTTGCCATTTGAAATAAAGGAAGATTCGAGGGGCACTGCGAGTGTTATAGTCGACGCTAATGGCACCGAGTATTCTGCTGAGGAATTGATGGCAATGGTTTTAACCTATGCTGTTAATTTAGCGGAATTCCATTCCAAAATTCCTATCAAAGATGCTGTAATAACTGTACCTCCTTACTTTGGGCAAGCTGAGCGAACTGGGTTGCTTCAGGCAGCACAATTGGCAGGAATTAACGTTCTTTCTTTGATAAACGAGCATTCTGGTGCCGCCTTACAGTACGGGATTGATAAGGACTTTTCAAATGAGTCAAGGCATGTCATATTCTATGACATGGGTTCAAGCAGTACCTATGCCTCACTTGTGCACTTCTCAGCGTACCAAAGTAAAGAATATGGAAAGACAGTATCAGTTAATCAGTTTCAGGTTAAGGATGTCTATTGGAATCCAGAGCTGGGTGGTCAAAATATGGAATTGCGGCTAGTGGAGCACTTCGCTAATGAATTTAATAATCAAGTTGGTGATGGATTTGATGTGAGAAAGTACCCTAAAGCTATGGCTAAATTAAAGAAACAGGTTAAACGATCCAAAGAAATTCTTAGTGCAAACACCGCTGCTCCAATTTCAGTTGAGTCACTTCATGCAGACACCGACTTCAGGAGTACTATCACCCGTGAGAAGTTTGAAGAGCTCTGTGGGGATATCTGGGAAAAATCTCTTTTGCCTGTGAAAGCGTTACTTGACAATTCAGGCTTGGCAGCTGACCAAATATACGCAGTGGAGTTGCTAGGAGGTGCAACCAGAGTTCCCAAACTACAGGCTAAGCTTCAAGAGTTCTTTGGGAGGAAAGAACTTGACAGACATCTTGATGCTGATGAAGCTATAGTTCTAGGCGCCTCCCTATATGCTGCAAATTTAAGTGATGGAATTAAATTGAACCGGAAGCTTGGAATGATTGATGGGTCAATGTATGGATTTGTGGTTGAGTTGAATGGCCCTGATCTTTCGAACGATGACAGTGCTAGGCAGTTACTTGTACCACGAATGAAAAAAATCTCAAGCAAGATGTTCAAATCAATTACCCATAACAAAGATTTTGAGGTTTCACTAGCTTATGACAGTGAAAATCTTTTGCCACCTGGCATTACCTCTCCTGAAGTTGCTCGATATCAAGTATCTGGTTTGACAGCTGCAACTGAGAAGTACTCGTCTCGGAATTTGTCCTCTCCCATAAAAGCAAACCTACATTTCTCTCTGAGTAGAAGTGGAATCCTTTCTTTGGATCGGGCAGATGCTGTTATTGAAATAACAGAATGGGTGGAAGTTCCTAGAAAGAATCTGACCAAAGAGAATTCTACCACAGATTCTTTGAACTTGACATTGGAAACTGGGGGTAGGAATAGTTCTGAGGAAAACAGTGAAAAGTTACAAACTGATGGAGGGGTTAGTGAGACATTGAATACTAGTGCAGAGGAGCAACCTGCCACAGATTCTGGTACAGAGAAAAAGTTGAAGAAGCGAACGTTTAGGGTTCCATTGAAGGTTGAATCAAAGCTAGTGGGACCTGGAATGTCTCTGTCAAAAGAGTTTCTTGCGGAAGCTAAGGGCAAATTACAGGCACTGGACAAGAAAGATGAAGAGAGAAGAAGAACAGCAGAATTAAAAAATAACTTAGAAGGATATATATACGCAACTAAGGAAAAGATTGAAACTTTGGAGGATTGTGCAAAAGTTTCTACTGAAGATGAACGCCAATTGTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGAGAAGATGCCAATGCTACAGAGTTTGAAGAGCGTCTAGATATGTTAAAAGCAGTGGGTGATCCAATTTTTTTCAGATTGAAGGAGCTCACATCTCGACCGGTGGCAGTTGATCATGCTCGTAAATACCATAATGAGCTGCAACAGATTGTACAAGAGTGGAAGACAAAAAAGTCTTGGCTTCCAAAAGAAGAAATAAATGCGGTTGTAAATGATGCTGAAAAGTTAAAGAATTGGTTGGACGAGGAGGAGGCTGAGCAGTCTAAGACTTCTGCGTTTAGCAAGCCAGCATTTACTTCCGAGGAAGTATATCTGAAGCTGTTTGATCTGCAAAGCAAGGTTGCCAAGATCAATAGAATCCCCAAACCCAAGCCTAAAATCCAGAAGCCTACAAAGAATGAAACTGAGAATAATAACACTGACACTGCAGACTCCACCTCAACAGATAGTGATCCCCAAAGCGATCAACCGGCAAACGAAAACTCAGAAGCTCATGATGCTCCCCAAAGCGATCAATCCGAAGTGGTTGATGAGCAACCCCAAGCTCATGATGAATTATGA 2700 0.4207 MTSILMKFGIIFSVLLLLFSPSQSAVFSVDLGSEWVKVAVVNLKPGQSPISVAINEMSKRKSPALVSFNSGDRLLAEEAAGLVARYPQNVYSQIRDLIGKPYNFSKKFLDSMYLPFEIKEDSRGTASVIVDANGTEYSAEELMAMVLTYAVNLAEFHSKIPIKDAVITVPPYFGQAERTGLLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGSSSTYASLVHFSAYQSKEYGKTVSVNQFQVKDVYWNPELGGQNMELRLVEHFANEFNNQVGDGFDVRKYPKAMAKLKKQVKRSKEILSANTAAPISVESLHADTDFRSTITREKFEELCGDIWEKSLLPVKALLDNSGLAADQIYAVELLGGATRVPKLQAKLQEFFGRKELDRHLDADEAIVLGASLYAANLSDGIKLNRKLGMIDGSMYGFVVELNGPDLSNDDSARQLLVPRMKKISSKMFKSITHNKDFEVSLAYDSENLLPPGITSPEVARYQVSGLTAATEKYSSRNLSSPIKANLHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTKENSTTDSLNLTLETGGRNSSEENSEKLQTDGGVSETLNTSAEEQPATDSGTEKKLKKRTFRVPLKVESKLVGPGMSLSKEFLAEAKGKLQALDKKDEERRRTAELKNNLEGYIYATKEKIETLEDCAKVSTEDERQLFVEKLDQVQDWLYTDGEDANATEFEERLDMLKAVGDPIFFRLKELTSRPVAVDHARKYHNELQQIVQEWKTKKSWLPKEEINAVVNDAEKLKNWLDEEEAEQSKTSAFSKPAFTSEEVYLKLFDLQSKVAKINRIPKPKPKIQKPTKNETENNNTDTADSTSTDSDPQSDQPANENSEAHDAPQSDQSEVVDEQPQAHDEL 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0310 899 PANTHER HSC70CB, ISOFORM G-RELATED 24 868 - -
Lele27g0310 899 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Lele27g0310 899 Gene3D Actin; Chain A, domain 4 265 350 - -
Lele27g0310 899 MobiDBLite consensus disorder prediction 563 616 - -
Lele27g0310 899 Coils Coil 649 669 - -
Lele27g0310 899 ProSitePatterns Heat shock hsp70 proteins family signature 2. 221 234 IPR018181 -
Lele27g0310 899 PRINTS 70kDa heat shock protein signature 369 385 - -
Lele27g0310 899 PRINTS 70kDa heat shock protein signature 165 185 - -
Lele27g0310 899 PRINTS 70kDa heat shock protein signature 57 69 - -
Lele27g0310 899 PRINTS 70kDa heat shock protein signature 25 38 - -
Lele27g0310 899 PRINTS 70kDa heat shock protein signature 401 421 - -
Lele27g0310 899 Gene3D - 29 416 - -
Lele27g0310 899 FunFam Heat shock 70 kDa protein 4 265 350 - -
Lele27g0310 899 SUPERFAMILY Actin-like ATPase domain 216 418 IPR043129 -
Lele27g0310 899 MobiDBLite consensus disorder prediction 586 607 - -
Lele27g0310 899 MobiDBLite consensus disorder prediction 845 889 - -
Lele27g0310 899 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Lele27g0310 899 Coils Coil 779 799 - -
Lele27g0310 899 CDD HYOU1-like_NBD 28 416 - -
Lele27g0310 899 FunFam Heat shock 70 kDa protein 4 638 750 - -
Lele27g0310 899 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 629 IPR029047 -
Lele27g0310 899 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Lele27g0310 899 Gene3D - 638 750 IPR029048 -
Lele27g0310 899 MobiDBLite consensus disorder prediction 832 899 - -
Lele27g0310 899 Gene3D - 92 145 - -
Lele27g0310 899 MobiDBLite consensus disorder prediction 563 579 - -
Lele27g0310 899 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 746 IPR029048 -
Lele27g0310 899 Gene3D - 211 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0310 Lele-ChrLele27 2644333 2652429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0310 22 532 Calmodulin-binding Proteins AT3G12580 29.143 2.24e-65 230