Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0298 ATGAGCCAGTCTAAAATCAAGCGTCGTATAGGTAAATATGAGGTGGGAAGGACCCTTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCAAGGAACACTGAAACTGGGGAGCCTGTGGCTATCAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAGATCAGGCGGGAAATAGCAACAATGAAGTTAATCAAGCATCCAAATGTTGTTCGATTATATGAGGTAATGGGGAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACAGGAGGAGAGCTCTTTGACAAAATTGTAAACCACGGACGGATGAGTGAAAAAGAAGCACGTAGTTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTCAAGCCAGAAAATTTGCTGCTAGATGCTTATGGCCAGCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTATCACAACAAGTCAAGGATGATGGACTGCTTCATACTACATGTGGAACCCCAAATTATGTTGCTCCTGAGGTCCTTGATGATAGAGGCTATGATGGAGCAACTGCAGACTTGTGGTCTTGTGGAGTAATTCTCTTTGTATTACTTGCAGGTTACTTGCCTTTTGATGACCCTAATCTTATGAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACTTGTCCCCCGTGGATTTCATTCAGTGCCTTGAAATTGATAACTCGAATTTTGGATCCTAACCCCATGACTCGTATCACTATATCTGAAATCTTGGCCGATGAATGGTTTAAGAAAGATTATAAGCCTCCAGTTTTTGAGGAGACAGGGGAGACCAACCTTGATGACATTGAAGCTGTCTTTAGAGATTCTGAAGAACACCTTGTGACGGAGAAGAAGGAAGAACAGCCAACAGCCATCAATGCGTTTGAATTAATTTCCATGTCCAAAGGGCTAAACCTCGAAAACTTGTTTGATATAGAGCAGGCATTGAAAAGAGAAACAAGGTTCACTTCAAGATGCCCTGCCAAAGAGATAGTTAACAAGATTGAAGAAGCTGTAAAGCCTCTTGGTTTTGATGTGCAGAAGAAAAACTACAGGATGAGGCTTGAGAATGTGAAAGCAGGAAGGAAGGGAAACCTTAATATTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCACACGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGTTCTACAAAAATCTTTCAACAAGGCTTGATGATGTTGTTTGGAAAGCTGAGGAGGAGGATGCTCAAGGAACGAAGTGA 1323 0.415 MSQSKIKRRIGKYEVGRTLGEGTFAKVKFARNTETGEPVAIKILEKEKVLKHKMAEQIRREIATMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIVNHGRMSEKEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGQLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLDDRGYDGATADLWSCGVILFVLLAGYLPFDDPNLMNLYKKISAAEFTCPPWISFSALKLITRILDPNPMTRITISEILADEWFKKDYKPPVFEETGETNLDDIEAVFRDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDIEQALKRETRFTSRCPAKEIVNKIEEAVKPLGFDVQKKNYRMRLENVKAGRKGNLNIATEIFQVAPSLHTVEVRKAKGDTLEFHKFYKNLSTRLDDVVWKAEEEDAQGTK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0298 440 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0298 440 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Lele27g0298 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lele27g0298 440 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0298 440 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lele27g0298 440 Pfam NAF domain 308 367 IPR004041 GO:0007165
Lele27g0298 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 419 - -
Lele27g0298 440 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Lele27g0298 440 FunFam Non-specific serine/threonine protein kinase 6 309 - -
Lele27g0298 440 CDD STKc_SnRK3 12 267 - -
Lele27g0298 440 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Lele27g0298 440 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Lele27g0298 440 Gene3D Kinase associated domain 1, KA1 305 430 - -
Lele27g0298 440 CDD CIPK_C 312 426 - -
Lele27g0298 440 FunFam Non-specific serine/threonine protein kinase 305 430 - -
Lele27g0298 440 SUPERFAMILY Protein kinase-like (PK-like) 9 283 IPR011009 -
Lele27g0298 440 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0298 Lele-ChrLele27 2526677 2531406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0298 3 411 CBL-interacting serine-threonine protein kinases AT2G26980 79.218 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele27g0298 Pkinase 4.7e-74 CL0016