Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele27g0296 | ATGCTCTATAGCATAATGGATCTGGCGAAGTCTCAAATTGAGACAAGTAGGAATTCAAATTCTTCAGAACGAAAAGCTGCATCCCAAAGTTCAGAACCAACTATCAGCAGGTCCATATCTTCTAATCTTAAATCCTTCAGCTTCAATGATCTAAAAGAAGCCACAAGAAATTTCAGACAAGAAAACTTAATTGGGGAGGGAGGATTTGGGTTTGTTTACAAGGGATGGATCAATGAGAACTCCTTCGCTCCCACGAGACCAGGGAGTGGGATCAGGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCGGAAGTCAATTATCTAGGTCAACTTTACCATGAAAATATAGTAAAACTTATTGGTTATTGCTCAGATTCTAAAAACAGGCTTCTAGTTTATGAGCTTATGGAGAACGGAAGCTTGGAGACTCATTTATTCAGAAAAGGTGTTAGGCCCTTATCATGGGCTGCACGGATCAATATTGCAGTTGGCGTTGCTAGAGGATTAGCATTTTTGCATACCTTGGATGCAAATGTTATCTACCGTGACTTGAAGACTTCTAATGTATTACTTGATTCAGACTTCAACTCAAAGCTTGCAGATTTTGGCTTGGCAAGAGATGGTCCTACCGGAGATAACACTCATGTTTCAACCAGAGTTATCGGAACTCAAGGTTATGCCGCACCAGAGTATGTAGCTACAGGGAGAAGGGTGGTAGAGGTTGACAAACTCGGAATTGCACGGGAAACTCTTGTCGATTGGGCGATGCCATTTCTCAAGGATGGCAAGCGAGTTTCGAGAATCATGGATTTGAGGTTAGGTGGCCAGTACTCGAAAACCGGAGCTCAAGCTGCAGCTGCAATTGCATATAAATGCCTAGATGCTGATCCAAAGTACAGACCAACTATGATACATGTTGTAGCCACGTTGGAAGAACTCCATTCCTCGAACACAACAATCCCGAGGACCCCACCAAAGTCTGAGTCTGGGAACAATACCATCAAGCATGCTCGTCATTCGCATTCGCAAAGGTCAACGAGAAAAGCACACTGA | 1077 | 0.4345 | MLYSIMDLAKSQIETSRNSNSSERKAASQSSEPTISRSISSNLKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGIRVAIKKLKPESFQGHKEWLAEVNYLGQLYHENIVKLIGYCSDSKNRLLVYELMENGSLETHLFRKGVRPLSWAARINIAVGVARGLAFLHTLDANVIYRDLKTSNVLLDSDFNSKLADFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGRRVVEVDKLGIARETLVDWAMPFLKDGKRVSRIMDLRLGGQYSKTGAQAAAAIAYKCLDADPKYRPTMIHVVATLEELHSSNTTIPRTPPKSESGNNTIKHARHSHSQRSTRKAH | 358 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele27g0296 | 358 | PANTHER | OS01G0588500 PROTEIN-RELATED | 21 | 322 | - | - | |
| Lele27g0296 | 358 | ProSitePatterns | Protein kinases ATP-binding region signature. | 64 | 97 | IPR017441 | GO:0005524 | |
| Lele27g0296 | 358 | MobiDBLite | consensus disorder prediction | 323 | 358 | - | - | |
| Lele27g0296 | 358 | Pfam | Protein kinase domain | 59 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele27g0296 | 358 | FunFam | Os07g0541700 protein | 144 | 231 | - | - | |
| Lele27g0296 | 358 | FunFam | Serine/threonine-protein kinase BIK1 | 23 | 143 | - | - | |
| Lele27g0296 | 358 | MobiDBLite | consensus disorder prediction | 14 | 36 | - | - | |
| Lele27g0296 | 358 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele27g0296 | 358 | MobiDBLite | consensus disorder prediction | 323 | 339 | - | - | |
| Lele27g0296 | 358 | Gene3D | Transferase(Phosphotransferase) domain 1 | 144 | 339 | - | - | |
| Lele27g0296 | 358 | SUPERFAMILY | Protein kinase-like (PK-like) | 34 | 328 | IPR011009 | - | |
| Lele27g0296 | 358 | ProSiteProfiles | Protein kinase domain profile. | 58 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele27g0296 | 358 | SMART | serkin_6 | 58 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele27g0296 | 358 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 143 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele27g0296 | Lele-ChrLele27 | 2486885 | 2489149 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele27g0296 | 37 | 318 | Glycoside Hydrolase | AT3G07070 | 43.506 | 4.33e-78 | 244 |
Transcription factors information