Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0293 ATGTCTCTTATTGATTTGGAAATGTTGGTTCGTGAGTTCCTTATTCCGTAATTTGGTAACCAGTCTTTTGAGCTGTGCACTGGCGCAACGTCTCGATTTGTTCGGTTTGATATAGTCCCCCATATTGCATATGGTCAAAATTTCTCCCTTGTTTTATGCTTTGTGATTCTGATTTTTCTTGCCTTCTCCTCTGTCTCAGAAATTCAAATAAAAGTAAGAACGATGAGCAACATGATGGGTGGAGGTGATGCTCCAAAAACGCCCAAACGTCGGCGGCCCGTGTTTGCAGTTGAAGAAGCCAGTTACAAAGGTAATGTTGGAGGAGAAGTACCTCTGAAGAAAGGCCCTTGGACAGCAGCTGAGGATGCGATTTTATTAGATTATGTCAAAAAACATGGAGAAGGAAATTGGAATGCAGTCCAAAGGCACTCAGGCCTTACCCGCTGTGGGAAAAGTTGCCGTCTACGATGGGCAAATCACTTGAGGCCAGAATTAAAAAAGGGTGCATTTACTGAAGAGGAGGAGCGCCGAATCATTGAGCTTCATGCTAGGATGGGAAACAAATGGGCTCGAATGGCAACAGAGTTGCCTGGACGTACAGATAATGAGATAAAGAATTACTGGAACACTAGAGTTAAGAGAATGGAACGAGCTGGATTACCAATTTATCCTCCTGAAATATGCCAGCGGGTACGCAGTCAAGAAAATTCGAATGTGGGTACTTTGATGAGTGGAGCCAACGAGCACTTTGATAGCCCACAAGATGTCTACTTCAATGTCCCAGATCTGGACTTCAAAGATTATGATGTCAGTCGAGCTTATCTACCATATGGTCCATCTATTTTTGATATTCATGAAAGCAGTCTGTTTCAACAAACTGTAGGCCCACCGCATAGTGATGTTTTATTGTTCGGAAACCCTCCGAAACGCCTTAGGGAGTCAAATATGCTTTATAATAGATTGGACAATTGTAGCGGTTGTATGATCCCGGCATATGATAAGTTTGCGGATTATGCTGCTGGGCCACCTCATCTTTTGCCATCTCCAAGCAATCTGTCCTTTGACCCCAATGATCCATTTCGTGGTGATAATCATGGCAGCCATGCCACTTTAAATGGCACTATCTCTTCTTCGGCGCCCATACCCGAGGCAATGAAGTTGGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGGTAGCTGGGATGCAAATGCATCCCCACTGCCTTCACTGGAGTCTGTTGACACATTGTTTCAGTCTTCTCCAGTTGAACAGTATCAGTCATGCAATGTTACTCCAGATAGTAGTGGTTTGTTAGAATCAATAATCTATGATAGCAAGCTTCCCAAGGCCTCAAATAATGATTCATTGTGGAAGATTCCTGATGAGTACCTACTGAATGTGGATAAAGCAGAGACAGAATGGGACCAACATGGGGACACAAATTCACCCTTAGGTCACTCTTCTGCCTCAGTTCTTACAGATTATACCCATCCTGTTAACATCTGCTCAGTTGATGACCCCTACTTCACTGAACACACAAAAGCAGGTCATGAAATGAGGCAGGAAGCAATTTCACAGGGTCCACCTTACGTTTCAAAAGGCAAAGAAACTTCTAATCATATAGACATAACAAGGCCGGATGCTTTGCTTGATATGTGTTGTTGGTCCAGGAATGATAGCGCTGATGTTGCCAGGGTGGATTTTGGAAAAAAATTTATACTATCAGATAACCAGACTTCATCAGCTTGGTTTGAAGATGATGCTGCTGTGATGCTGGAAGAGTGGGATTTGTAA 1800 0.4322 MSLIDLEMLVREFLIPXFGNQSFELCTGATSRFVRFDIVPHIAYGQNFSLVLCFVILIFLAFSSVSEIQIKVRTMSNMMGGGDAPKTPKRRRPVFAVEEASYKGNVGGEVPLKKGPWTAAEDAILLDYVKKHGEGNWNAVQRHSGLTRCGKSCRLRWANHLRPELKKGAFTEEEERRIIELHARMGNKWARMATELPGRTDNEIKNYWNTRVKRMERAGLPIYPPEICQRVRSQENSNVGTLMSGANEHFDSPQDVYFNVPDLDFKDYDVSRAYLPYGPSIFDIHESSLFQQTVGPPHSDVLLFGNPPKRLRESNMLYNRLDNCSGCMIPAYDKFADYAAGPPHLLPSPSNLSFDPNDPFRGDNHGSHATLNGTISSSAPIPEAMKLELPSLQYLETQQGSWDANASPLPSLESVDTLFQSSPVEQYQSCNVTPDSSGLLESIIYDSKLPKASNNDSLWKIPDEYLLNVDKAETEWDQHGDTNSPLGHSSASVLTDYTHPVNICSVDDPYFTEHTKAGHEMRQEAISQGPPYVSKGKETSNHIDITRPDALLDMCCWSRNDSADVARVDFGKKFILSDNQTSSAWFEDDAAVMLEEWDL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0293 599 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 161 IPR017930 -
Lele27g0293 599 SUPERFAMILY Homeodomain-like 111 208 IPR009057 -
Lele27g0293 599 MobiDBLite consensus disorder prediction 349 377 - -
Lele27g0293 599 ProSiteProfiles Myb-like domain profile. 109 161 IPR001005 -
Lele27g0293 599 Gene3D - 113 166 - -
Lele27g0293 599 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 216 IPR017930 -
Lele27g0293 599 FunFam Transcription factor GAMYB 169 215 - -
Lele27g0293 599 Pfam Myb-like DNA-binding domain 114 161 IPR001005 -
Lele27g0293 599 Pfam Myb-like DNA-binding domain 167 210 IPR001005 -
Lele27g0293 599 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Lele27g0293 599 SMART sant 166 214 IPR001005 -
Lele27g0293 599 SMART sant 113 163 IPR001005 -
Lele27g0293 599 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 97 564 - -
Lele27g0293 599 FunFam MYB-related transcription factor 113 166 - -
Lele27g0293 599 Gene3D - 169 215 - -
Lele27g0293 599 CDD SANT 116 161 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0293 Lele-ChrLele27 2454867 2459796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0293 112 552 MYB Transcription Factor Family AT5G06100 37.367 6.81e-80 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0293 Myb_DNA-binding 2.5e-15 CL0123